RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 HSDL1Q3SXM5 330 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 TSGA10IPQ3SY00 556 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 USP17L6PQ6QN14 398 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
IMP4-216ENST00000490895 FANCBQ8NB91 859 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 MAFAQ8NHW3 353 aaPredicted RBP17.7■□□□□ 0.42
IMP4-216ENST00000490895 GPKOWQ92917 476 aaPredicted RBP eCLIP17.7■□□□□ 0.42
IMP4-216ENST00000490895 INPP4AQ96PE3 977 aaPredicted RBP17.7■□□□□ 0.42
IMP4-216ENST00000490895 KATNAL1Q9BW62 490 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 GTF2IRD1Q9UHL9 959 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 PRUNE2Q8WUY3 3088 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 CDC45O75419 566 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 ICAM3P32942 547 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 MFSD10Q14728 455 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 RAB30Q15771 203 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 RAB11FIP4Q86YS3 637 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 CAGE1Q8TC20 777 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 CUL5Q93034 780 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 HDAC6Q9UBN7 1215 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 MSRAQ9UJ68 235 aa17.69■□□□□ 0.42
IMP4-216ENST00000490895 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 SORBS3O60504 671 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 FOSL2P15408 326 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
IMP4-216ENST00000490895 RBL2Q08999 1139 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 SEMA3FQ13275 785 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 KIAA0753Q2KHM9 967 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 GNPTABQ3T906 1256 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 XRRA1Q6P2D8 792 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 CCDC155Q8N6L0 562 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 C7orf31Q8N865 590 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 AFAP1L1Q8TED9 768 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 DHX38Q92620 1227 aaKnown RBP17.68■□□□□ 0.42
IMP4-216ENST00000490895 ALG1Q9BT22 464 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 BCAS3Q9H6U6 928 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 MLXIPQ9HAP2 919 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
IMP4-216ENST00000490895 SCN5AQ14524 2016 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 ZBBXA8MT70 800 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 PCNX4Q63HM2 1172 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 APOA5Q6Q788 366 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 DHX32Q7L7V1 743 aaKnown RBP17.67■□□□□ 0.42
IMP4-216ENST00000490895 MICU3Q86XE3 530 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 C16orf70Q9BSU1 422 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 PSTPIP2Q9H939 334 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 RTEL1Q9NZ71 1219 aa17.67■□□□□ 0.42
IMP4-216ENST00000490895 YBX2Q9Y2T7 364 aaKnown RBP17.67■□□□□ 0.42
IMP4-216ENST00000490895 CHD7Q9P2D1 2997 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 hCG_1642624A0A1W2PR95 340 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 FIBPO43427 364 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 ACTN1P12814 892 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 ATP2A2P16615 1042 aaKnown RBP17.66■□□□□ 0.42
IMP4-216ENST00000490895 NEDD9Q14511 834 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 GPNMBQ14956 572 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 ADCK5Q3MIX3 580 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 METTL7BQ6UX53 244 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 SYNE3Q6ZMZ3 975 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.66■□□□□ 0.42
IMP4-216ENST00000490895 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 MYO9BQ13459 2157 aa17.66■□□□□ 0.42
IMP4-216ENST00000490895 TANC1Q9C0D5 1861 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 TET1Q8NFU7 2136 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 DLL1O00548 723 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 CKBP12277 381 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 SELPP16109 830 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 RABGGTBP53611 331 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 PTK7Q13308 1070 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 KRT32Q14532 448 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 LRRC8DQ7L1W4 858 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 SENP7Q9BQF6 1050 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 FTOQ9C0B1 505 aaKnown RBP eCLIP17.65■□□□□ 0.42
IMP4-216ENST00000490895 BRPF3Q9ULD4 1205 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 PCDHA11Q9Y5I1 949 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 CUL9Q8IWT3 2517 aa17.65■□□□□ 0.42
IMP4-216ENST00000490895 TRIP12Q14669 1992 aaPredicted RBP17.64■□□□□ 0.41
IMP4-216ENST00000490895 H3BRB1 525 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 PARNO95453 639 aaKnown RBP17.64■□□□□ 0.41
IMP4-216ENST00000490895 ZNF200P98182 395 aaPredicted RBP17.64■□□□□ 0.41
IMP4-216ENST00000490895 FUT2Q10981 343 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 HIC1Q14526 733 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 TRIM71Q2Q1W2 868 aaKnown RBP17.64■□□□□ 0.41
IMP4-216ENST00000490895 CYFIP1Q7L576 1253 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 KCNB2Q92953 911 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 CCDC136Q96JN2 1154 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 PRDM12Q9H4Q4 367 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 TUT1Q9H6E5 874 aaKnown RBP17.64■□□□□ 0.41
IMP4-216ENST00000490895 SLC28A3Q9HAS3 691 aa17.64■□□□□ 0.41
IMP4-216ENST00000490895 RBM28Q9NW13 759 aaKnown RBP17.64■□□□□ 0.41
IMP4-216ENST00000490895 NOP56O00567 594 aaKnown RBP17.63■□□□□ 0.41
IMP4-216ENST00000490895 ZBTB43O43298 467 aa17.63■□□□□ 0.41
IMP4-216ENST00000490895 BAIAP3O94812 1187 aa17.63■□□□□ 0.41
IMP4-216ENST00000490895 LGALS2P05162 132 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms