RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
UBA1-209ENST00000490869 HAS3O00219 553 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 TGFB3P10600 412 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 ACTN1P12814 892 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 SP2Q02086 613 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 HSDL1Q3SXM5 330 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 GNPTABQ3T906 1256 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 RNF20Q5VTR2 975 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 RAB11FIP4Q86YS3 637 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 CAGE1Q8TC20 777 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 NKX2-4Q9H2Z4 354 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 MLXIPQ9HAP2 919 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 HDAC6Q9UBN7 1215 aa12.58□□□□□ -0.4
UBA1-209ENST00000490869 PIK3CDO00329 1044 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 PPFIA4O75335 1185 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 CDC45O75419 566 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 STAM2O75886 525 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 HOXD8P13378 290 aaPredicted RBP12.57□□□□□ -0.4
UBA1-209ENST00000490869 ATP2A2P16615 1042 aaKnown RBP12.57□□□□□ -0.4
UBA1-209ENST00000490869 RABGGTBP53611 331 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 MRPS9P82933 396 aaKnown RBP12.57□□□□□ -0.4
UBA1-209ENST00000490869 USP17L6PQ6QN14 398 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 AFAP1L1Q8TED9 768 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
UBA1-209ENST00000490869 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 FTOQ9C0B1 505 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBA1-209ENST00000490869 SLC28A3Q9HAS3 691 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 RTEL1Q9NZ71 1219 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 YBX2Q9Y2T7 364 aaKnown RBP12.57□□□□□ -0.4
UBA1-209ENST00000490869 SCN5AQ14524 2016 aa12.57□□□□□ -0.4
UBA1-209ENST00000490869 SPATA31C2B4DYI2 1134 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 MEIS2O14770 477 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 FIBPO43427 364 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 SELPP16109 830 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 ICAM3P32942 547 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 PCNX4Q63HM2 1172 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 TMTC3Q6ZXV5 915 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 LRRC8DQ7L1W4 858 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 SGMS1Q86VZ5 419 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 CCDC82Q8N4S0 544 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 DHX38Q92620 1227 aaKnown RBP12.56□□□□□ -0.4
UBA1-209ENST00000490869 GAS2L1Q99501 681 aaPredicted RBP12.56□□□□□ -0.4
UBA1-209ENST00000490869 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 PRDM12Q9H4Q4 367 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 PCDHA11Q9Y5I1 949 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 GBF1Q92538 1859 aa12.56□□□□□ -0.4
UBA1-209ENST00000490869 MYH7BA7E2Y1 1941 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 BAZ2BQ9UIF8 2168 aaKnown RBP12.55□□□□□ -0.4
UBA1-209ENST00000490869 hCG_1642624A0A1W2PR95 340 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 NOP56O00567 594 aaKnown RBP12.55□□□□□ -0.4
UBA1-209ENST00000490869 CKBP12277 381 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 MYOGP15173 224 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 ZNF200P98182 395 aaPredicted RBP12.55□□□□□ -0.4
UBA1-209ENST00000490869 RBL2Q08999 1139 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 PTK7Q13308 1070 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 NEDD9Q14511 834 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 SLC9A7Q96T83 725 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 BCAS3Q9H6U6 928 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 PSTPIP2Q9H939 334 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 COL6A3P12111 3177 aa12.55□□□□□ -0.4
UBA1-209ENST00000490869 H3BRB1 525 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 PARNO95453 639 aaKnown RBP12.54□□□□□ -0.4
UBA1-209ENST00000490869 LGALS2P05162 132 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 EXOSC10Q01780 885 aaKnown RBP12.54□□□□□ -0.4
UBA1-209ENST00000490869 HIC1Q14526 733 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 ADCK5Q3MIX3 580 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 APOA5Q6Q788 366 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 METTL7BQ6UX53 244 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 CYFIP1Q7L576 1253 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
UBA1-209ENST00000490869 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 NLRX1Q86UT6 975 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
UBA1-209ENST00000490869 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
UBA1-209ENST00000490869 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
UBA1-209ENST00000490869 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 KRT32Q14532 448 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 GPNMBQ14956 572 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 UBE2SQ16763 222 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 TRIM71Q2Q1W2 868 aaKnown RBP12.53□□□□□ -0.4
UBA1-209ENST00000490869 TSGA10IPQ3SY00 556 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 CNKSR3Q6P9H4 555 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 WNT8BQ93098 351 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 CCDC136Q96JN2 1154 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 GPR20Q99678 358 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
UBA1-209ENST00000490869 CNTNAP5Q8WYK1 1306 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms