RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 SLC38A10Q9HBR0 1119 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 KCNMB3Q9NPA1 279 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 DONSONQ9NYP3 566 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 NFE2L3Q9Y4A8 694 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 ZBED4O75132 1171 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDAC9-225ENST00000490851 PTGS1P23219 599 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 MSNP26038 577 aaKnown RBP11.28□□□□□ -0.6
HDAC9-225ENST00000490851 EPHX2P34913 555 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 CCT6AP40227 531 aaKnown RBP11.28□□□□□ -0.6
HDAC9-225ENST00000490851 ASIC1P78348 528 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 ECM1Q16610 540 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-225ENST00000490851 KCNK18Q7Z418 384 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 LENG9Q96B70 501 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 XPO4Q9C0E2 1151 aaKnown RBP11.28□□□□□ -0.6
HDAC9-225ENST00000490851 PITPNM2Q9BZ72 1349 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 CYP3A7-CYP3A51PA0A087WV96 503 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 MSH4O15457 936 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 SERPINC1P01008 464 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 ERCC3P19447 782 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 CYP3A7P24462 503 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 PDIA5Q14554 519 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 DYMQ7RTS9 669 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 ETNPPLQ8TBG4 499 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 MED15Q96RN5 788 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 ELP3Q9H9T3 547 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 KBTBD4Q9NVX7 518 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 TMOD4Q9NZQ9 345 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
HDAC9-225ENST00000490851 POTEB3A0JP26 581 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 CCDC66A2RUB6 948 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 GOLGA6L6A8MZA4 724 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 POTECB2RU33 542 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 VWA5AO00534 786 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 CHMP2AO43633 222 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.6
HDAC9-225ENST00000490851 OFD1O75665 1012 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 FANCCQ00597 558 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 ZC3H12AQ5D1E8 599 aaKnown RBP11.27□□□□□ -0.6
HDAC9-225ENST00000490851 POTEBQ6S5H4 581 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 NSMFQ6X4W1 530 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.27□□□□□ -0.6
HDAC9-225ENST00000490851 CCDC186Q7Z3E2 898 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 CLEC4DQ8WXI8 215 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 HPS3Q969F9 1004 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 CLMNQ96JQ2 1002 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 SAMSN1Q9NSI8 373 aaKnown RBP11.27□□□□□ -0.6
HDAC9-225ENST00000490851 BLOC1S4Q9NUP1 217 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.6
HDAC9-225ENST00000490851 CSADQ9Y600 493 aa11.27□□□□□ -0.6
HDAC9-225ENST00000490851 PPP1R3GB7ZBB8 358 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 COQ9O75208 318 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 CAPN2P17655 700 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 PLS1Q14651 629 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 CCDC144BQ3MJ40 725 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 Q4G0T1 1027 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 HS1BP3Q53T59 392 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 SV2BQ7L1I2 683 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 SLFN12Q8IYM2 578 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 LARP4BQ92615 738 aaKnown RBP11.27□□□□□ -0.61
HDAC9-225ENST00000490851 MBOAT7Q96N66 472 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 PURBQ96QR8 312 aaKnown RBP11.27□□□□□ -0.61
HDAC9-225ENST00000490851 TRIM9Q9C026 710 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 RMND1Q9NWS8 449 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 ZKSCAN5Q9Y2L8 839 aa11.27□□□□□ -0.61
HDAC9-225ENST00000490851 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 MEIS1O00470 390 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 PEX10O60683 326 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 SNRNP48Q6IEG0 339 aaKnown RBP11.26□□□□□ -0.61
HDAC9-225ENST00000490851 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 MOXD1Q6UVY6 613 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 CREBRFQ8IUR6 639 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 OTUD5Q96G74 571 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 CALR3Q96L12 384 aaKnown RBP11.26□□□□□ -0.61
HDAC9-225ENST00000490851 TRERF1Q96PN7 1200 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 CUEDC2Q9H467 287 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 EHMT1Q9H9B1 1298 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 AFG3L2Q9Y4W6 797 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 IGLV3-22A0A075B6J6 115 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 MYMKA6NI61 221 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 E9PMD0 336 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 KLRC4O43908 158 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 MED24O75448 989 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms