RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 CEP95Q96GE4 821 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF587Q96SQ5 575 aaPredicted RBP5.69□□□□□ -1.5
EPCAM-206ENST00000490733 MTA3Q9BTC8 594 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 MYL10Q9BUA6 226 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 TAF1DQ9H5J8 278 aaPredicted RBP5.69□□□□□ -1.5
EPCAM-206ENST00000490733 MKNK2Q9HBH9 465 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 TCP11L1Q9NUJ3 509 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 TMOD2Q9NZR1 351 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 SWAP70Q9UH65 585 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 PITPNM2Q9BZ72 1349 aa5.69□□□□□ -1.5
EPCAM-206ENST00000490733 NID2Q14112 1375 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 PTPRFP10586 1907 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TCHHQ07283 1943 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 ADM5C9JUS6 153 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 JAK2O60674 1132 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 PFKFB2O60825 505 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TSPY3P0CV98 308 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TSPY8P0CW00 308 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 RXRAP19793 462 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 CDC27P30260 824 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TNNI2P48788 182 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 NT5C2P49902 561 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 ARSDP51689 593 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 CCT2P78371 535 aaKnown RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TBC1D8BQ0IIM8 1120 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TROAPQ12815 778 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 STK3Q13188 491 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TNFAIP1Q13829 316 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 CCINQ13939 588 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 WTAPQ15007 396 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 CERKLQ49MI3 558 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 USP50Q70EL3 339 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 RASGRP2Q7LDG7 609 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 ALYREFQ86V81 257 aaKnown RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 IQCA1Q86XH1 822 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 APOBEC3FQ8IUX4 373 aaKnown RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 CCDC83Q8IWF9 413 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF444Q8N0Y2 327 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 MICALL1Q8N3F8 863 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 IFT43Q96FT9 208 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF274Q96GC6 653 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 ZSCAN31Q96LW9 406 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 TMEM47Q9BQJ4 181 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 UBAC1Q9BSL1 405 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 PLVAPQ9BX97 442 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 UBE2OQ9C0C9 1292 aaKnown RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 SAP130Q9H0E3 1048 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 IGFLR1Q9H665 355 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 NCOA5Q9HCD5 579 aaKnown RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.68□□□□□ -1.52e-20■■■■■ 226.7
EPCAM-206ENST00000490733 SH2B1Q9NRF2 756 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 MTMR4Q9NYA4 1195 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 NOP53Q9NZM5 478 aaKnown RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 CXXC1Q9P0U4 656 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 HERC5Q9UII4 1024 aaKnown RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 FZD1Q9UP38 647 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 USP20Q9Y2K6 914 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.68□□□□□ -1.5
EPCAM-206ENST00000490733 SMCHD1A6NHR9 2005 aa5.68□□□□□ -1.5
EPCAM-206ENST00000490733 PARP14Q460N5 1801 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 GOLGA8BA8MQT2 603 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 UBE2Q2LH0YL09 131 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 OPLAHO14841 1288 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 GH2P01242 217 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 EPB42P16452 691 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 NFKB1P19838 968 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 FGD1P98174 961 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 SEPT2Q15019 361 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 NTRK3Q16288 839 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 SLC35G1Q2M3R5 365 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 IFIT1BQ5T764 474 aaKnown RBP5.67□□□□□ -1.5
EPCAM-206ENST00000490733 C20orf204Q6ZNR8 217 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 KRT25Q7Z3Z0 450 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 MICU3Q86XE3 530 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 DGKHQ86XP1 1220 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 CCDC144CPQ8IYA2 1237 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF654Q8IZM8 581 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 CCDC82Q8N4S0 544 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 CRACR2BQ8N4Y2 399 aaPredicted RBP5.67□□□□□ -1.5
EPCAM-206ENST00000490733 NSUN7Q8NE18 718 aaKnown RBP5.67□□□□□ -1.5
EPCAM-206ENST00000490733 SMARCC2Q8TAQ2 1214 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 INTS4Q96HW7 963 aaKnown RBP5.67□□□□□ -1.5
EPCAM-206ENST00000490733 CCDC17Q96LX7 622 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 PNMA5Q96PV4 448 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 MKNK1Q9BUB5 465 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 TRAIPQ9BWF2 469 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 SLKQ9H2G2 1235 aaPredicted RBP5.67□□□□□ -1.5
EPCAM-206ENST00000490733 EFCC1Q9HA90 598 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF287Q9HBT7 754 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 NMRK2Q9NPI5 230 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 ZFATQ9P243 1243 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF112Q9UJU3 913 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 PPP2R3BQ9Y5P8 575 aa5.67□□□□□ -1.5
EPCAM-206ENST00000490733 TRPM7Q96QT4 1865 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 RLFQ13129 1914 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 A0A1W2PRG0 241 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ERICH2A1L162 156 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 IQCA1LA6NCM1 817 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms