RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 MFSD10Q14728 455 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 HSDL1Q3SXM5 330 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 CELF3Q5SZQ8 465 aaKnown RBP11.93□□□□□ -0.5
RBM39-236ENST00000490484 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 GDF6Q6KF10 455 aaPredicted RBP11.93□□□□□ -0.5
RBM39-236ENST00000490484 DHX32Q7L7V1 743 aaKnown RBP11.93□□□□□ -0.5
RBM39-236ENST00000490484 DEFB128Q7Z7B8 93 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 SESTD1Q86VW0 696 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 C7orf31Q8N865 590 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 TIFAQ96CG3 184 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 CDX2Q99626 313 aaPredicted RBP11.93□□□□□ -0.5
RBM39-236ENST00000490484 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 PBX4Q9BYU1 374 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 MLXIPQ9HAP2 919 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 RTEL1Q9NZ71 1219 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 PRUNE2Q8WUY3 3088 aa11.93□□□□□ -0.5
RBM39-236ENST00000490484 MYH7BA7E2Y1 1941 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 GBF1Q92538 1859 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 DOCK5Q9H7D0 1870 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 TMEM265A0A087WTH1 108 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 NOP56O00567 594 aaKnown RBP11.92□□□□□ -0.5
RBM39-236ENST00000490484 ZBTB43O43298 467 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 STAM2O75886 525 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 HOXD8P13378 290 aaPredicted RBP11.92□□□□□ -0.5
RBM39-236ENST00000490484 PSEN2P49810 448 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 EXOSC10Q01780 885 aaKnown RBP11.92□□□□□ -0.5
RBM39-236ENST00000490484 BFSP2Q13515 415 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 UBE2SQ16763 222 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 RTN1Q16799 776 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 KIAA0753Q2KHM9 967 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 PCNX4Q63HM2 1172 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 RPUSD2Q8IZ73 545 aaKnown RBP11.92□□□□□ -0.5
RBM39-236ENST00000490484 SLC17A8Q8NDX2 589 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 MYLIPQ8WY64 445 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 INPP4AQ96PE3 977 aaPredicted RBP11.92□□□□□ -0.5
RBM39-236ENST00000490484 PSTPIP2Q9H939 334 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 RBM28Q9NW13 759 aaKnown RBP11.92□□□□□ -0.5
RBM39-236ENST00000490484 HDAC6Q9UBN7 1215 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 GTF2IRD1Q9UHL9 959 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 BRPF3Q9ULD4 1205 aa11.92□□□□□ -0.5
RBM39-236ENST00000490484 NAP1L2Q9ULW6 460 aaPredicted RBP11.92□□□□□ -0.5
RBM39-236ENST00000490484 KLF18A0A0U1RQI7 1052 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 GOLGA8AA7E2F4 631 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 GOLGA8BA8MQT2 603 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 FIBPO43427 364 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 PFKMP08237 780 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 IQCF3P0C7M6 154 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 TGFB3P10600 412 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 CPA1P15085 419 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 FOSL2P15408 326 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 FGD1P98174 961 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 SP4Q02446 784 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 SEMA3FQ13275 785 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 WWC2Q6AWC2 1192 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 METTL7BQ6UX53 244 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 CCDC155Q8N6L0 562 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 RETREG2Q8NC44 543 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 VWCEQ96DN2 955 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 JAKMIP1Q96N16 626 aaKnown RBP11.91□□□□□ -0.5
RBM39-236ENST00000490484 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 ZNF576Q9H609 170 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 CHD7Q9P2D1 2997 aa11.91□□□□□ -0.5
RBM39-236ENST00000490484 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 SPATA31C2B4DYI2 1134 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 HAS3O00219 553 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 PPFIA4O75335 1185 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 LGALS2P05162 132 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 HMGB1P09429 215 aaKnown RBP11.9□□□□□ -0.5
RBM39-236ENST00000490484 ICAM3P32942 547 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 HSPA4P34932 840 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 RFC2P35250 354 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 GRIN2CQ14957 1233 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 RAB30Q15771 203 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 LRRC8DQ7L1W4 858 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 CYFIP1Q7L576 1253 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 CAGE1Q8TC20 777 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 DHX38Q92620 1227 aaKnown RBP11.9□□□□□ -0.5
RBM39-236ENST00000490484 C16orf70Q9BSU1 422 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
RBM39-236ENST00000490484 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
RBM39-236ENST00000490484 VCANP13611 3396 aa11.9□□□□□ -0.51
RBM39-236ENST00000490484 REC8O95072 547 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 ACTN1P12814 892 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 METAP2P50579 478 aaKnown RBP eCLIP11.89□□□□□ -0.51
RBM39-236ENST00000490484 RABGGTBP53611 331 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 NAPAP54920 295 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
RBM39-236ENST00000490484 NEDD9Q14511 834 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 TYW1BQ6NUM6 668 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 XRRA1Q6P2D8 792 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 Q6ZUG5 572 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 TRIM50Q86XT4 487 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 MAFAQ8NHW3 353 aaPredicted RBP11.89□□□□□ -0.51
RBM39-236ENST00000490484 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
RBM39-236ENST00000490484 NKX2-4Q9H2Z4 354 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms