RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PNMA1Q8ND90 353 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 DBF4BQ8NFT6 615 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 ESR2Q92731 530 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
VARS-227ENST00000489979 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
VARS-227ENST00000489979 MRPL11Q9Y3B7 192 aaKnown RBP16.31■□□□□ 0.2
VARS-227ENST00000489979 GRXCR2A6NFK2 248 aa16.3■□□□□ 0.2
VARS-227ENST00000489979 SORBS3O60504 671 aa16.3■□□□□ 0.2
VARS-227ENST00000489979 AMHP03971 560 aa16.3■□□□□ 0.2
VARS-227ENST00000489979 THPOP40225 353 aa16.3■□□□□ 0.2
VARS-227ENST00000489979 HTRA4P83105 476 aaPredicted RBP16.3■□□□□ 0.2
VARS-227ENST00000489979 ALYREFQ86V81 257 aaKnown RBP16.3■□□□□ 0.2
VARS-227ENST00000489979 FBXO11Q86XK2 927 aa16.3■□□□□ 0.2
VARS-227ENST00000489979 MRPL38Q96DV4 380 aaKnown RBP16.3■□□□□ 0.2
VARS-227ENST00000489979 KAT14Q9H8E8 782 aa16.3■□□□□ 0.2
VARS-227ENST00000489979 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
VARS-227ENST00000489979 EMSYQ7Z589 1322 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 RSPH10B2B2RC85 870 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 H3BQ06 376 aaPredicted RBP16.29■□□□□ 0.2
VARS-227ENST00000489979 DHX16O60231 1041 aaKnown RBP16.29■□□□□ 0.2
VARS-227ENST00000489979 CFBP00751 764 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 RSPH10BP0C881 870 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
VARS-227ENST00000489979 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
VARS-227ENST00000489979 PTPROQ16827 1216 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 ASPRV1Q53RT3 343 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
VARS-227ENST00000489979 UIMC1Q96RL1 719 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
VARS-227ENST00000489979 KDM4AO75164 1064 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 PPFIA4O75335 1185 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 MYCLP12524 364 aaPredicted RBP16.28■□□□□ 0.2
VARS-227ENST00000489979 ALADP13716 330 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 PUS10Q3MIT2 529 aaKnown RBP16.28■□□□□ 0.2
VARS-227ENST00000489979 EPC2Q52LR7 807 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 TIGD5Q53EQ6 642 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 CCDC178Q5BJE1 867 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 CELF3Q5SZQ8 465 aaKnown RBP16.28■□□□□ 0.2
VARS-227ENST00000489979 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 IQCA1Q86XH1 822 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 ANKS1AQ92625 1134 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 JMJD4Q9H9V9 463 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 MYO7AQ13402 2215 aa16.28■□□□□ 0.2
VARS-227ENST00000489979 ZNF213O14771 459 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 RGS20O76081 388 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 GGPS1O95749 300 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 PARP1P09874 1014 aaKnown RBP16.27■□□□□ 0.2
VARS-227ENST00000489979 HSD17B4P51659 736 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 HSDL1Q3SXM5 330 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 PLEKHG4Q58EX7 1191 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 BANK1Q8NDB2 785 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 SAMD11Q96NU1 681 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 YME1L1Q96TA2 773 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
VARS-227ENST00000489979 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.19
VARS-227ENST00000489979 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 TRIM6-TRIM34B2RNG4 842 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 H3BNC9 293 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 OPLAHO14841 1288 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 UPP2O95045 317 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 SP2Q02086 613 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 GPM6BQ13491 265 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 CSPP1Q1MSJ5 1256 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 TCEAL5Q5H9L2 206 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 KCNV1Q6PIU1 500 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 ATP6V0A1Q93050 837 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 ZSCAN10Q96SZ4 725 aaPredicted RBP16.26■□□□□ 0.19
VARS-227ENST00000489979 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
VARS-227ENST00000489979 C17orf102A2RUQ5 167 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 B4E1Z4 1266 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 DCXO43602 365 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 UBA1P22314 1058 aaKnown RBP16.25■□□□□ 0.19
VARS-227ENST00000489979 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
VARS-227ENST00000489979 TMEM192Q8IY95 271 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 ENAHQ8N8S7 591 aaPredicted RBP16.25■□□□□ 0.19
VARS-227ENST00000489979 SEPT8Q92599 483 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 TOP1MTQ969P6 601 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 PABPC5Q96DU9 382 aaKnown RBP16.25■□□□□ 0.19
VARS-227ENST00000489979 AMNQ9BXJ7 453 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 OSBPL7Q9BZF2 842 aa16.25■□□□□ 0.19
VARS-227ENST00000489979 TREHO43280 583 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 CTSHP09668 335 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
VARS-227ENST00000489979 NT5C2P49902 561 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 GHRHRQ02643 423 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 PGM5Q15124 567 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 VSIG10LQ86VR7 867 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 STAG2Q8N3U4 1231 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 IL31RAQ8NI17 732 aa16.24■□□□□ 0.19
VARS-227ENST00000489979 GPKOWQ92917 476 aaPredicted RBP eCLIP16.24■□□□□ 0.19
VARS-227ENST00000489979 ZFP91Q96JP5 570 aaPredicted RBP16.24■□□□□ 0.19
VARS-227ENST00000489979 NSUN3Q9H649 340 aaKnown RBP16.24■□□□□ 0.19
VARS-227ENST00000489979 MLXIPQ9HAP2 919 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms