RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 KCNV1Q6PIU1 500 aa22.47■■□□□ 1.19
TNFRSF1B-202ENST00000489921 PIBF1Q8WXW3 757 aa22.47■■□□□ 1.19
TNFRSF1B-202ENST00000489921 ZBBXA8MT70 800 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 SH2B2O14492 632 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 DDAH1O94760 285 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 GGPS1O95749 300 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 TGFB3P10600 412 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 ATP2A2P16615 1042 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 UBA1P22314 1058 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 SMARCA1P28370 1054 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 CCND2P30279 289 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 RBL2Q08999 1139 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 BFSP2Q13515 415 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 SRBD1Q8N5C6 995 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 RETREG2Q8NC44 543 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 PCDHA11Q9Y5I1 949 aa22.46■■□□□ 1.19
TNFRSF1B-202ENST00000489921 PPFIA4O75335 1185 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 PLEKHA8P1O95397 391 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 MCM5P33992 734 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 SEMA3FQ13275 785 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 MFSD10Q14728 455 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 KIAA0753Q2KHM9 967 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CREB3L3Q68CJ9 461 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CAGE1Q8TC20 777 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 WNT8BQ93098 351 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 C16orf70Q9BSU1 422 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 ALG1Q9BT22 464 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 SLC28A3Q9HAS3 691 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 NOD1Q9Y239 953 aa22.45■■□□□ 1.18
TNFRSF1B-202ENST00000489921 MEIS2O14770 477 aa22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 ZNF200P98182 395 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 TRIM71Q2Q1W2 868 aaKnown RBP22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 TRAF7Q6Q0C0 670 aa22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CASC1Q6TDU7 716 aa22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 AFAP1L1Q8TED9 768 aa22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 TMEM87BQ96K49 555 aa22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 SPATA33Q96N06 139 aa22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 INPP4AQ96PE3 977 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CKBP12277 381 aa22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 ICAM3P32942 547 aa22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 LIFRP42702 1097 aa22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 TCTN1Q2MV58 587 aa22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 USP17L6PQ6QN14 398 aa22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CMTR1Q8N1G2 835 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 C7orf31Q8N865 590 aa22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CTCFLQ8NI51 663 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 KATNAL1Q9BW62 490 aa22.43■■□□□ 1.18
TNFRSF1B-202ENST00000489921 SPATA31C2B4DYI2 1134 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 PIK3CDO00329 1044 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 ACTN1P12814 892 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 RXRAP19793 462 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 BMP2KLQ5H9B9 411 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 TMTC2Q8N394 836 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 RRP36Q96EU6 259 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 GAS2L1Q99501 681 aaPredicted RBP22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 LRRC2Q9BYS8 371 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 FTOQ9C0B1 505 aaKnown RBP eCLIP22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 PRDM6Q9NQX0 595 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 TELO2Q9Y4R8 837 aa22.42■■□□□ 1.18
TNFRSF1B-202ENST00000489921 NBNO60934 754 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 ARHGEF15O94989 841 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CXCL10P02778 98 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 SELPP16109 830 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 KIF5BP33176 963 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 PTK7Q13308 1070 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 LRRC8DQ7L1W4 858 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CCDC155Q8N6L0 562 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 PHOSPHO2Q8TCD6 241 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 LZTS2Q9BRK4 669 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 RTEL1Q9NZ71 1219 aa22.41■■□□□ 1.18
TNFRSF1B-202ENST00000489921 STAM2O75886 525 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 HOXC8P31273 242 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 MBTPS1Q14703 1052 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 PPP2R2DQ66LE6 453 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 RAB11FIP4Q86YS3 637 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 SLC9A7Q96T83 725 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 MLXIPQ9HAP2 919 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 ANO2Q9NQ90 1003 aa22.4■■□□□ 1.18
TNFRSF1B-202ENST00000489921 CCDC69A6NI79 296 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CA3P07451 260 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 GNAQP50148 359 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 ZNF618Q5T7W0 954 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 PCNX4Q63HM2 1172 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 NFXL1Q6ZNB6 911 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SGMS1Q86VZ5 419 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 HERC6Q8IVU3 1022 aa22.39■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TTC28Q96AY4 2481 aa22.38■■□□□ 1.17
TNFRSF1B-202ENST00000489921 hCG_1642624A0A1W2PR95 340 aa22.38■■□□□ 1.17
TNFRSF1B-202ENST00000489921 BAIAP3O94812 1187 aa22.38■■□□□ 1.17
TNFRSF1B-202ENST00000489921 EXOSC10Q01780 885 aaKnown RBP22.38■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CENPQQ7L2Z9 268 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CYFIP1Q7L576 1253 aa22.38■■□□□ 1.17
TNFRSF1B-202ENST00000489921 FANCBQ8NB91 859 aa22.38■■□□□ 1.17
TNFRSF1B-202ENST00000489921 H3BRB1 525 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 FIBPO43427 364 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 LGALS2P05162 132 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CALM1P0DP23 149 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CALM2P0DP24 149 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CALM3P0DP25 149 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 WDR5P61964 334 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms