RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 COASYQ13057 564 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 BRD3Q15059 726 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 TRAPPC11Q7Z392 1133 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 IKZF4Q9H2S9 585 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
BRD9-208ENST00000489816 SALL4Q9UJQ4 1053 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 PCNTO95613 3336 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 ZBTB22O15209 634 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 HLA-DOAP06340 250 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 KIF11P52732 1056 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 UBXN2AP68543 259 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 PABPC4Q13310 644 aaKnown RBP eCLIP17.43■□□□□ 0.384e-6■■■□□ 17.5
BRD9-208ENST00000489816 CASP8Q14790 479 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 PODXL2Q9NZ53 605 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 L1RE1Q9UN81 338 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 CRKP46108 304 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 GPBP1Q86WP2 473 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 HDAC7Q8WUI4 952 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 COA1Q9GZY4 146 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 RIC8AQ9NPQ8 531 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 ADAM21Q9UKJ8 722 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 SCAF8Q9UPN6 1271 aaKnown RBP17.42■□□□□ 0.38
BRD9-208ENST00000489816 FAN1Q9Y2M0 1017 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 MYBL2P10244 700 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.385e-6■■■□□ 14.9
BRD9-208ENST00000489816 MEA1Q16626 185 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 NFRKBQ6P4R8 1299 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
BRD9-208ENST00000489816 SP8Q8IXZ3 490 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
BRD9-208ENST00000489816 SECISBP2LQ93073 1101 aaKnown RBP17.42■□□□□ 0.38
BRD9-208ENST00000489816 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.42■□□□□ 0.38
BRD9-208ENST00000489816 MMP10P09238 476 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 MYOCDQ8IZQ8 938 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.42■□□□□ 0.38
BRD9-208ENST00000489816 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
BRD9-208ENST00000489816 PCDHA13Q9Y5I0 950 aa17.42■□□□□ 0.38
BRD9-208ENST00000489816 PSMD14O00487 310 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 POLR2FP61218 127 aaKnown RBP17.41■□□□□ 0.38
BRD9-208ENST00000489816 CERKLQ49MI3 558 aaPredicted RBP17.41■□□□□ 0.38
BRD9-208ENST00000489816 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 HDXQ7Z353 690 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 CRAMP1Q96RY5 1269 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 NUP58Q9BVL2 599 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 SIK3Q9Y2K2 1263 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 MED24O75448 989 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 ERLIN1O75477 346 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 HOXA10P31260 410 aaPredicted RBP17.41■□□□□ 0.38
BRD9-208ENST00000489816 CYP2C19P33261 490 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 CASP5P51878 434 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 HNRNPH2P55795 449 aaKnown RBP17.41■□□□□ 0.38
BRD9-208ENST00000489816 PPARDQ03181 441 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 CDC37Q16543 378 aaPredicted RBP17.41■□□□□ 0.38
BRD9-208ENST00000489816 DNAJC19Q96DA6 116 aa17.41■□□□□ 0.38
BRD9-208ENST00000489816 TDRD3Q9H7E2 651 aaKnown RBP17.41■□□□□ 0.38
BRD9-208ENST00000489816 ESYT2A0FGR8 921 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 PLA2G4BP0C869 781 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 SNHG28P0DPA3 235 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 ADRA2BP18089 450 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 JAG1P78504 1218 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
BRD9-208ENST00000489816 MAN2A1Q16706 1144 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 LRRC55Q6ZSA7 311 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
BRD9-208ENST00000489816 MSANTD4Q8NCY6 345 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 ERGIC2Q96RQ1 377 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 STK17AQ9UEE5 414 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 PACSIN2Q9UNF0 486 aaPredicted RBP17.4■□□□□ 0.38
BRD9-208ENST00000489816 EIF3CLB5ME19 914 aaKnown RBP17.4■□□□□ 0.38
BRD9-208ENST00000489816 MAGEA1P43355 309 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 KCNMA1Q12791 1236 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
BRD9-208ENST00000489816 MS4A14Q96JA4 679 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 EIF3CQ99613 913 aaKnown RBP17.4■□□□□ 0.38
BRD9-208ENST00000489816 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 MYO1AQ9UBC5 1043 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 PLAGL2Q9UPG8 496 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 COL24A1Q17RW2 1714 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 IGKV6D-41A0A0C4DH26 115 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 ACTN1P12814 892 aa17.4■□□□□ 0.38
BRD9-208ENST00000489816 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
BRD9-208ENST00000489816 MAP2K7O14733 419 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 VAV2P52735 878 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 ANO3Q9BYT9 981 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 TMX4Q9H1E5 349 aaPredicted RBP17.39■□□□□ 0.37
BRD9-208ENST00000489816 GOLPH3Q9H4A6 298 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 RAB21Q9UL25 225 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 CHMP2AO43633 222 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 CERS3Q8IU89 383 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 TSG101Q99816 390 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 LSM14BQ9BX40 385 aaKnown RBP17.39■□□□□ 0.37
BRD9-208ENST00000489816 SMCHD1A6NHR9 2005 aa17.39■□□□□ 0.37
BRD9-208ENST00000489816 PVALEFA0A1B0GWK0 134 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 RSPH10B2B2RC85 870 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 ZBTB39O15060 712 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 RSPH10BP0C881 870 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 CHRNA5P30532 468 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 HSPA1LP34931 641 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms