RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 FIBPO43427 364 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 CCNT1O60563 726 aaKnown RBP18.28■□□□□ 0.52
CLIC4-203ENST00000489758 ARP10275 920 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 ADCYAP1R1P41586 468 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 MTMR1Q13613 665 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 TTC38Q5R3I4 469 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 NLRX1Q86UT6 975 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 ARMC5Q96C12 935 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 NAP1L4Q99733 375 aaKnown RBP18.28■□□□□ 0.52
CLIC4-203ENST00000489758 KCNH7Q9NS40 1196 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 DDX25Q9UHL0 483 aaKnown RBP18.28■□□□□ 0.52
CLIC4-203ENST00000489758 PCDHB6Q9Y5E3 794 aa18.28■□□□□ 0.52
CLIC4-203ENST00000489758 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.52
CLIC4-203ENST00000489758 ATP2B1P20020 1258 aa18.27■□□□□ 0.52
CLIC4-203ENST00000489758 NUCB2P80303 420 aa18.27■□□□□ 0.52
CLIC4-203ENST00000489758 SETQ01105 290 aaPredicted RBP18.27■□□□□ 0.52
CLIC4-203ENST00000489758 SP2Q02086 613 aa18.27■□□□□ 0.52
CLIC4-203ENST00000489758 IQSEC1Q6DN90 963 aa18.27■□□□□ 0.52
CLIC4-203ENST00000489758 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.52
CLIC4-203ENST00000489758 AGO4Q9HCK5 861 aaKnown RBP18.27■□□□□ 0.52
CLIC4-203ENST00000489758 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.27■□□□□ 0.52
CLIC4-203ENST00000489758 DDX41Q9UJV9 622 aaKnown RBP18.27■□□□□ 0.52
CLIC4-203ENST00000489758 MAFGO15525 162 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 SEPT4O43236 478 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 ATP9AO75110 1047 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 TGFB3P10600 412 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 KCNA2P16389 499 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 SMPD1P17405 629 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 PTGS1P23219 599 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 MCM7P33993 719 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 ORC2Q13416 577 aaPredicted RBP18.26■□□□□ 0.51
CLIC4-203ENST00000489758 TTLL4Q14679 1199 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 ZNF174Q15697 407 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 C4orf32Q8N8J7 132 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 ETNPPLQ8TBG4 499 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 ZNF333Q96JL9 665 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 KCNMB3Q9NPA1 279 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 FAM184BQ9ULE4 1060 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 MRVI1Q9Y6F6 885 aa18.26■□□□□ 0.51
CLIC4-203ENST00000489758 MSH4O15457 936 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 AKR1A1P14550 325 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 UBA1P22314 1058 aaKnown RBP18.25■□□□□ 0.51
CLIC4-203ENST00000489758 SOX10P56693 466 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 TNFAIP2Q03169 654 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 ITGB3BPQ13352 177 aaPredicted RBP18.25■□□□□ 0.51
CLIC4-203ENST00000489758 MTFR1Q15390 333 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 LY6KQ17RY6 165 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 DUSP28Q4G0W2 176 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 LENG1Q96BZ8 264 aaPredicted RBP18.25■□□□□ 0.51
CLIC4-203ENST00000489758 FTOQ9C0B1 505 aaKnown RBP eCLIP18.25■□□□□ 0.51
CLIC4-203ENST00000489758 UNC93B1Q9H1C4 597 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 TMEM60Q9H2L4 133 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 BCAS3Q9H6U6 928 aa18.25■□□□□ 0.51
CLIC4-203ENST00000489758 HMX1Q9NP08 348 aaPredicted RBP18.25■□□□□ 0.51
CLIC4-203ENST00000489758 GNEQ9Y223 722 aaKnown RBP18.25■□□□□ 0.51
CLIC4-203ENST00000489758 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 DHX15O43143 795 aaKnown RBP18.24■□□□□ 0.51
CLIC4-203ENST00000489758 NEMFO60524 1076 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 TXNP10599 105 aaKnown RBP18.24■□□□□ 0.51
CLIC4-203ENST00000489758 CNGA1P29973 690 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
CLIC4-203ENST00000489758 HAS1Q92839 578 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 COPS5Q92905 334 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 SLC5A5Q92911 643 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 MTMR9Q96QG7 549 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 SENP7Q9BQF6 1050 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.24■□□□□ 0.515e-6■■□□□ 13.3
CLIC4-203ENST00000489758 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
CLIC4-203ENST00000489758 CHMP5Q9NZZ3 219 aa18.24■□□□□ 0.51
CLIC4-203ENST00000489758 IPO5O00410 1097 aaKnown RBP18.23■□□□□ 0.51
CLIC4-203ENST00000489758 TBX3O15119 743 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 CCL5P13501 91 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 ARHGAP1Q07960 439 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 GJA10Q969M2 543 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 USP28Q96RU2 1077 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 ZNF577Q9BSK1 485 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 PKD2L1Q9P0L9 805 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 DDX20Q9UHI6 824 aaKnown RBP18.23■□□□□ 0.51
CLIC4-203ENST00000489758 CLIC4Q9Y696 253 aa18.23■□□□□ 0.51
CLIC4-203ENST00000489758 NKRFO15226 690 aaKnown RBP eCLIP18.22■□□□□ 0.51
CLIC4-203ENST00000489758 PTGDRQ13258 359 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 SF3A1Q15459 793 aaKnown RBP18.22■□□□□ 0.51
CLIC4-203ENST00000489758 CALCRLQ16602 461 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 FOXD4L6Q3SYB3 417 aaPredicted RBP18.22■□□□□ 0.51
CLIC4-203ENST00000489758 CELF3Q5SZQ8 465 aaKnown RBP18.22■□□□□ 0.51
CLIC4-203ENST00000489758 ANO1Q5XXA6 986 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 LHX8Q68G74 356 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 FOXD4L3Q6VB84 417 aaPredicted RBP18.22■□□□□ 0.51
CLIC4-203ENST00000489758 EMID1Q96A84 441 aaPredicted RBP18.22■□□□□ 0.51
CLIC4-203ENST00000489758 CHAMP1Q96JM3 812 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 FAM20AQ96MK3 541 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 Q9Y3F1 56 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 NFASCO94856 1347 aa18.22■□□□□ 0.51
CLIC4-203ENST00000489758 CTAGE5O15320 804 aa18.21■□□□□ 0.51
CLIC4-203ENST00000489758 DUSP11O75319 330 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms