RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 GCOM1H8Y6P7 765 aaPredicted RBP13.84□□□□□ -0.19
SFXN3-207ENST00000489434 POLR2MP0CAP2 368 aa13.84□□□□□ -0.19
SFXN3-207ENST00000489434 CCND2P30279 289 aa13.84□□□□□ -0.19
SFXN3-207ENST00000489434 GHRHRQ02643 423 aa13.84□□□□□ -0.19
SFXN3-207ENST00000489434 CELF3Q5SZQ8 465 aaKnown RBP13.84□□□□□ -0.19
SFXN3-207ENST00000489434 MYSM1Q5VVJ2 828 aa13.84□□□□□ -0.19
SFXN3-207ENST00000489434 DHX38Q92620 1227 aaKnown RBP13.84□□□□□ -0.19
SFXN3-207ENST00000489434 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
SFXN3-207ENST00000489434 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
SFXN3-207ENST00000489434 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
SFXN3-207ENST00000489434 HAS3O00219 553 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 NBNO60934 754 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 GJB5O95377 273 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 GGPS1O95749 300 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 HOXD8P13378 290 aaPredicted RBP13.83□□□□□ -0.2
SFXN3-207ENST00000489434 HOXA13P31271 388 aaPredicted RBP13.83□□□□□ -0.2
SFXN3-207ENST00000489434 SART3Q15020 963 aaKnown RBP13.83□□□□□ -0.2
SFXN3-207ENST00000489434 KRT40Q6A162 431 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 VSIG10LQ86VR7 867 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 HOMER1Q86YM7 354 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
SFXN3-207ENST00000489434 TGS1Q96RS0 853 aaKnown RBP13.83□□□□□ -0.2
SFXN3-207ENST00000489434 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
SFXN3-207ENST00000489434 BAZ2BQ9UIF8 2168 aaKnown RBP13.83□□□□□ -0.2
SFXN3-207ENST00000489434 LCHNA4D1U4 455 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 PALM3A6NDB9 673 aaPredicted RBP13.82□□□□□ -0.2
SFXN3-207ENST00000489434 NOP56O00567 594 aaKnown RBP13.82□□□□□ -0.2
SFXN3-207ENST00000489434 OPLAHO14841 1288 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 LGR5O75473 907 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 ARHGEF15O94989 841 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 IGHDP01880 384 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 AMHP03971 560 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 THPOP40225 353 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 DEFB103AP81534 67 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 GPNMBQ14956 572 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 PGM5Q15124 567 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 SEC23AQ15436 765 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 GNPTABQ3T906 1256 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 ZNF618Q5T7W0 954 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 RALYLQ86SE5 291 aaKnown RBP13.82□□□□□ -0.2
SFXN3-207ENST00000489434 FCHSD1Q86WN1 690 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 MTUS1Q9ULD2 1270 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
SFXN3-207ENST00000489434 RSPH10B2B2RC85 870 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
SFXN3-207ENST00000489434 SORBS3O60504 671 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 RGS20O76081 388 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 RSPH10BP0C881 870 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 ERVK-21P61565 698 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 HSDL1Q3SXM5 330 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 TMCO2Q7Z6W1 182 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-207ENST00000489434 SERINC5Q86VE9 423 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 GDPD5Q8WTR4 605 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 PTPRSQ13332 1948 aa13.81□□□□□ -0.2
SFXN3-207ENST00000489434 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 C17orf102A2RUQ5 167 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 H3BRB1 525 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 LPXNO60711 386 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-207ENST00000489434 STAM2O75886 525 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 GNAT1P11488 350 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 UBA1P22314 1058 aaKnown RBP13.8□□□□□ -0.2
SFXN3-207ENST00000489434 ZNF200P98182 395 aaPredicted RBP13.8□□□□□ -0.2
SFXN3-207ENST00000489434 GRM4Q14833 912 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 TRIM71Q2Q1W2 868 aaKnown RBP13.8□□□□□ -0.2
SFXN3-207ENST00000489434 FAM117BQ6P1L5 589 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 CYB5R4Q7L1T6 521 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 CATIPQ7Z7H3 387 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 IL31RAQ8NI17 732 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 PIGSQ96S52 555 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 USP26Q9BXU7 913 aa13.8□□□□□ -0.2
SFXN3-207ENST00000489434 TUT1Q9H6E5 874 aaKnown RBP13.8□□□□□ -0.2
SFXN3-207ENST00000489434 COL4A4P53420 1690 aaPredicted RBP13.79□□□□□ -0.2
SFXN3-207ENST00000489434 LINC01553A4QN01 128 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 CAND2O75155 1236 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 NEDD9Q14511 834 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 WTAPQ15007 396 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 SPRED2Q7Z698 418 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 MYOCDQ8IZQ8 938 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 SEPT8Q92599 483 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 C16orf70Q9BSU1 422 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 SUGCTQ9HAC7 445 aa13.79□□□□□ -0.2
SFXN3-207ENST00000489434 ZNF215Q9UL58 517 aaPredicted RBP13.79□□□□□ -0.2
SFXN3-207ENST00000489434 SIP14410 1827 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 MICAL3Q7RTP6 2002 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 KAT6AQ92794 2004 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 LGALS2P05162 132 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 SP2Q02086 613 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 MBTPS1Q14703 1052 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 PTPROQ16827 1216 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 TRAF7Q6Q0C0 670 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 METTL7BQ6UX53 244 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms