RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ZNF618Q5T7W0 954 aa22.17■■□□□ 1.14
GGPS1-206ENST00000488594 TRAF7Q6Q0C0 670 aa22.17■■□□□ 1.14
GGPS1-206ENST00000488594 SMC5Q8IY18 1101 aa22.17■■□□□ 1.14
GGPS1-206ENST00000488594 PDCD2LQ9BRP1 358 aa22.17■■□□□ 1.14
GGPS1-206ENST00000488594 ARIH1Q9Y4X5 557 aaPredicted RBP22.17■■□□□ 1.14
GGPS1-206ENST00000488594 TRIP12Q14669 1992 aaPredicted RBP22.17■■□□□ 1.14
GGPS1-206ENST00000488594 LGR5O75473 907 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 TGFB3P10600 412 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 TRAF1Q13077 416 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 CELF3Q5SZQ8 465 aaKnown RBP22.16■■□□□ 1.14
GGPS1-206ENST00000488594 IFIT1BQ5T764 474 aaKnown RBP22.16■■□□□ 1.14
GGPS1-206ENST00000488594 MYSM1Q5VVJ2 828 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 STOX1Q6ZVD7 989 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 EPHX3Q9H6B9 360 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 INSL6Q9Y581 213 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 LAMA4Q16363 1823 aa22.16■■□□□ 1.14
GGPS1-206ENST00000488594 KIAA1217Q5T5P2 1943 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 LINC01553A4QN01 128 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 OPLAHO14841 1288 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 CHD1LQ86WJ1 897 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 PLEKHM2Q8IWE5 1019 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 SPATA33Q96N06 139 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 RWDD1Q9H446 243 aaPredicted RBP22.15■■□□□ 1.14
GGPS1-206ENST00000488594 MTUS1Q9ULD2 1270 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 HCN4Q9Y3Q4 1203 aa22.15■■□□□ 1.14
GGPS1-206ENST00000488594 KLRF2D3W0D1 207 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 ZBTB5O15062 677 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 MYCLP12524 364 aaPredicted RBP22.14■■□□□ 1.14
GGPS1-206ENST00000488594 TCTN1Q2MV58 587 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 TMEM31Q5JXX7 168 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 SERINC5Q86VE9 423 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 VSIG10LQ86VR7 867 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 MTMR8Q96EF0 704 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 LRFN3Q9BTN0 628 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 PCDHA1Q9Y5I3 950 aa22.14■■□□□ 1.14
GGPS1-206ENST00000488594 COL4A4P53420 1690 aaPredicted RBP22.14■■□□□ 1.14
GGPS1-206ENST00000488594 PTPRSQ13332 1948 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 RGS20O76081 388 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 GGPS1O95749 300 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 AMHP03971 560 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 ZNF200P98182 395 aaPredicted RBP22.13■■□□□ 1.13
GGPS1-206ENST00000488594 MBTPS1Q14703 1052 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 HSDL1Q3SXM5 330 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 STAG2Q8N3U4 1231 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 WNT8BQ93098 351 aa22.13■■□□□ 1.13
GGPS1-206ENST00000488594 RSPH10B2B2RC85 870 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 RSPH10BP0C881 870 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 THPOP40225 353 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 PGM5Q15124 567 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 UBE2ZQ9H832 354 aaPredicted RBP22.12■■□□□ 1.13
GGPS1-206ENST00000488594 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.12■■□□□ 1.13
GGPS1-206ENST00000488594 PPP1R11O60927 126 aaPredicted RBP22.12■■□□□ 1.13
GGPS1-206ENST00000488594 UBA1P22314 1058 aaKnown RBP22.12■■□□□ 1.13
GGPS1-206ENST00000488594 CCND2P30279 289 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 NUCB1Q02818 461 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 MKRN4PQ13434 485 aaPredicted RBP22.12■■□□□ 1.13
GGPS1-206ENST00000488594 FAM117BQ6P1L5 589 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 C16orf70Q9BSU1 422 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 MLXIPQ9HAP2 919 aa22.12■■□□□ 1.13
GGPS1-206ENST00000488594 C17orf102A2RUQ5 167 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 CAND2O75155 1236 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 HOXA13P31271 388 aaPredicted RBP22.11■■□□□ 1.13
GGPS1-206ENST00000488594 HTRA4P83105 476 aaPredicted RBP22.11■■□□□ 1.13
GGPS1-206ENST00000488594 HIC1Q14526 733 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 SEC23AQ15436 765 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 LEXMQ3ZCV2 418 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.11■■□□□ 1.13
GGPS1-206ENST00000488594 FBXO22Q8NEZ5 403 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 DBF4BQ8NFT6 615 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 ATP6V0A1Q93050 837 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 SAMD11Q96NU1 681 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 MAD2L2Q9UI95 211 aa22.11■■□□□ 1.13
GGPS1-206ENST00000488594 PALM3A6NDB9 673 aaPredicted RBP22.1■■□□□ 1.13
GGPS1-206ENST00000488594 H3BRB1 525 aa22.1■■□□□ 1.13
GGPS1-206ENST00000488594 GCOM1H8Y6P7 765 aaPredicted RBP22.1■■□□□ 1.13
GGPS1-206ENST00000488594 GPR37L1O60883 481 aa22.1■■□□□ 1.13
GGPS1-206ENST00000488594 POLR2MP0CAP2 368 aa22.1■■□□□ 1.13
GGPS1-206ENST00000488594 SP2Q02086 613 aa22.1■■□□□ 1.13
GGPS1-206ENST00000488594 PTPROQ16827 1216 aa22.1■■□□□ 1.13
GGPS1-206ENST00000488594 PLEKHG4Q58EX7 1191 aa22.1■■□□□ 1.13
GGPS1-206ENST00000488594 MYOCDQ8IZQ8 938 aa22.1■■□□□ 1.13
GGPS1-206ENST00000488594 SP7Q8TDD2 431 aaPredicted RBP22.1■■□□□ 1.13
GGPS1-206ENST00000488594 TUT1Q9H6E5 874 aaKnown RBP22.1■■□□□ 1.13
GGPS1-206ENST00000488594 HOXC8P31273 242 aa22.09■■□□□ 1.13
GGPS1-206ENST00000488594 GNPTABQ3T906 1256 aa22.09■■□□□ 1.13
GGPS1-206ENST00000488594 IL31RAQ8NI17 732 aa22.09■■□□□ 1.13
GGPS1-206ENST00000488594 SEPT8Q92599 483 aa22.09■■□□□ 1.13
GGPS1-206ENST00000488594 MYH6P13533 1939 aa22.08■■□□□ 1.13
GGPS1-206ENST00000488594 PI4K2BG5E9Z4 385 aa22.08■■□□□ 1.12
GGPS1-206ENST00000488594 SORBS3O60504 671 aa22.08■■□□□ 1.12
GGPS1-206ENST00000488594 STAM2O75886 525 aa22.08■■□□□ 1.12
GGPS1-206ENST00000488594 TRDNQ13061 729 aa22.08■■□□□ 1.12
GGPS1-206ENST00000488594 HOMER1Q86YM7 354 aa22.08■■□□□ 1.12
GGPS1-206ENST00000488594 MRPL38Q96DV4 380 aaKnown RBP22.08■■□□□ 1.12
GGPS1-206ENST00000488594 C17orf80Q9BSJ5 609 aa22.08■■□□□ 1.12
GGPS1-206ENST00000488594 USP26Q9BXU7 913 aa22.08■■□□□ 1.12
GGPS1-206ENST00000488594 NOP56O00567 594 aaKnown RBP22.07■■□□□ 1.12
GGPS1-206ENST00000488594 LGALS2P05162 132 aa22.07■■□□□ 1.12
GGPS1-206ENST00000488594 SMIM10L2AP0DMW4 78 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms