RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SLC12A7Q9Y666 1083 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 STAM2O75886 525 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 F2P00734 622 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 SELPP16109 830 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 UBA1P22314 1058 aaKnown RBP14.36□□□□□ -0.11
SREBF1-215ENST00000487401 LIFRP42702 1097 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 SP2Q02086 613 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 HSDL1Q3SXM5 330 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 BMP2KLQ5H9B9 411 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 RNF20Q5VTR2 975 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
SREBF1-215ENST00000487401 SRBD1Q8N5C6 995 aaKnown RBP14.36□□□□□ -0.11
SREBF1-215ENST00000487401 LRRC37A2A6NM11 1700 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 HAS3O00219 553 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 NOP56O00567 594 aaKnown RBP14.35□□□□□ -0.11
SREBF1-215ENST00000487401 PLEKHA8P1O95397 391 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 PARNO95453 639 aaKnown RBP14.35□□□□□ -0.11
SREBF1-215ENST00000487401 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
SREBF1-215ENST00000487401 IGFBP4P22692 258 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 PTK7Q13308 1070 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 NEDD9Q14511 834 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 PPP2R2DQ66LE6 453 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 XRRA1Q6P2D8 792 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 USP17L6PQ6QN14 398 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 PHOSPHO2Q8TCD6 241 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 PPM1EQ8WY54 764 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 GPKOWQ92917 476 aaPredicted RBP eCLIP14.35□□□□□ -0.11
SREBF1-215ENST00000487401 RTEL1Q9NZ71 1219 aa14.35□□□□□ -0.11
SREBF1-215ENST00000487401 SPATA31C2B4DYI2 1134 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 KIF28PB7ZC32 967 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 FIBPO43427 364 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 MYOGP15173 224 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 RXRAP19793 462 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 KCNJ6P48051 423 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 MRPS9P82933 396 aaKnown RBP14.34□□□□□ -0.11
SREBF1-215ENST00000487401 NLRX1Q86UT6 975 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 RAB11FIP4Q86YS3 637 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 CMTR1Q8N1G2 835 aaKnown RBP14.34□□□□□ -0.11
SREBF1-215ENST00000487401 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 DHX38Q92620 1227 aaKnown RBP14.34□□□□□ -0.11
SREBF1-215ENST00000487401 INPP4AQ96PE3 977 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-215ENST00000487401 CTAGE1Q96RT6 745 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-215ENST00000487401 LRRC2Q9BYS8 371 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 PSTPIP2Q9H939 334 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 MCM3APO60318 1980 aa14.34□□□□□ -0.11
SREBF1-215ENST00000487401 PIK3CDO00329 1044 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 BAIAP3O94812 1187 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 CKBP12277 381 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 ICAM3P32942 547 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-215ENST00000487401 METTL7BQ6UX53 244 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 CYFIP1Q7L576 1253 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 CCDC82Q8N4S0 544 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 FRMPD4Q14CM0 1322 aa14.33□□□□□ -0.12
SREBF1-215ENST00000487401 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 H3BRB1 525 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 MEIS2O14770 477 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 RBL2Q08999 1139 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 ADGRE1Q14246 886 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 PCNX4Q63HM2 1172 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 TMTC3Q6ZXV5 915 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 HERC6Q8IVU3 1022 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 USP38Q8NB14 1042 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 C16orf70Q9BSU1 422 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 USP26Q9BXU7 913 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 TUT1Q9H6E5 874 aaKnown RBP14.32□□□□□ -0.12
SREBF1-215ENST00000487401 BCAS3Q9H6U6 928 aa14.32□□□□□ -0.12
SREBF1-215ENST00000487401 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 hCG_1642624A0A1W2PR95 340 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 CDC45O75419 566 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 LGALS2P05162 132 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 CA3P07451 260 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 GNAT1P11488 350 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 THPOP40225 353 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 COL9A3Q14050 684 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-215ENST00000487401 GPNMBQ14956 572 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 CCDC85BQ15834 202 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-215ENST00000487401 UTP14CQ5TAP6 766 aaKnown RBP14.31□□□□□ -0.12
SREBF1-215ENST00000487401 CNKSR3Q6P9H4 555 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 HEATR3Q7Z4Q2 680 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 SGMS1Q86VZ5 419 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 GIMAP8Q8ND71 665 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-215ENST00000487401 SYMPKQ92797 1274 aaKnown RBP14.31□□□□□ -0.12
SREBF1-215ENST00000487401 ATP6V0A1Q93050 837 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 CDHR1Q96JP9 859 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 SENP7Q9BQF6 1050 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 ZBED2Q9BTP6 218 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 RBM28Q9NW13 759 aaKnown RBP14.31□□□□□ -0.12
SREBF1-215ENST00000487401 LCTP09848 1927 aa14.31□□□□□ -0.12
SREBF1-215ENST00000487401 ABHD14A-ACY1A0A1B0GW23 586 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 SPDYE3A6NKU9 549 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 TLL1O43897 1013 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 NBNO60934 754 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms