RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 STXBP3O00186 592 aa18.23■□□□□ 0.51
GABPA-203ENST00000487266 NAPAP54920 295 aa18.23■□□□□ 0.51
GABPA-203ENST00000487266 LAMC2Q13753 1193 aa18.23■□□□□ 0.51
GABPA-203ENST00000487266 PCNX4Q63HM2 1172 aa18.23■□□□□ 0.51
GABPA-203ENST00000487266 C16orf59Q7L2K0 433 aa18.23■□□□□ 0.51
GABPA-203ENST00000487266 PPTC7Q8NI37 304 aa18.23■□□□□ 0.51
GABPA-203ENST00000487266 SPATA33Q96N06 139 aa18.23■□□□□ 0.51
GABPA-203ENST00000487266 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
GABPA-203ENST00000487266 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.23■□□□□ 0.51
GABPA-203ENST00000487266 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
GABPA-203ENST00000487266 UPF3BQ9BZI7 483 aaKnown RBP18.23■□□□□ 0.51
GABPA-203ENST00000487266 TRIP12Q14669 1992 aaPredicted RBP18.22■□□□□ 0.51
GABPA-203ENST00000487266 NID2Q14112 1375 aa18.22■□□□□ 0.51
GABPA-203ENST00000487266 KPNA6O60684 536 aa18.22■□□□□ 0.51
GABPA-203ENST00000487266 TOB2Q14106 344 aaPredicted RBP18.22■□□□□ 0.51
GABPA-203ENST00000487266 DGKDQ16760 1214 aa18.22■□□□□ 0.51
GABPA-203ENST00000487266 NFRKBQ6P4R8 1299 aa18.22■□□□□ 0.51
GABPA-203ENST00000487266 SCLYQ96I15 445 aa18.22■□□□□ 0.51
GABPA-203ENST00000487266 AGXT2Q9BYV1 514 aa18.22■□□□□ 0.51
GABPA-203ENST00000487266 PSMA5P28066 241 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 RCAN1P53805 252 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 RUFY3Q7L099 469 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 TMEM199Q8N511 208 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 CTAGE1Q96RT6 745 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 ALG1Q9BT22 464 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 SEZ6LQ9BYH1 1024 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 NCOA5Q9HCD5 579 aaKnown RBP18.21■□□□□ 0.51
GABPA-203ENST00000487266 ZSWIM6Q9HCJ5 1215 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 PCDHA6Q9UN73 950 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 PCDHA8Q9Y5H6 950 aa18.21■□□□□ 0.51
GABPA-203ENST00000487266 SPATA31C2B4DYI2 1134 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 ADAMTS3O15072 1205 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 F2P00734 622 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 HOXD8P13378 290 aaPredicted RBP18.2■□□□□ 0.5
GABPA-203ENST00000487266 ICAM3P32942 547 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 PSEN2P49810 448 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
GABPA-203ENST00000487266 SP4Q02446 784 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 PPIGQ13427 754 aaKnown RBP eCLIP18.2■□□□□ 0.5
GABPA-203ENST00000487266 MFSD10Q14728 455 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 TMEM240Q5SV17 173 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 FAM109BQ6ICB4 259 aaPredicted RBP18.2■□□□□ 0.5
GABPA-203ENST00000487266 GDF6Q6KF10 455 aaPredicted RBP18.2■□□□□ 0.5
GABPA-203ENST00000487266 KCNV1Q6PIU1 500 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 CYFIP1Q7L576 1253 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 DEFB123Q8N688 67 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 PHKBQ93100 1093 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 MLXIPQ9HAP2 919 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 GBF1Q92538 1859 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 COL6A3P12111 3177 aa18.2■□□□□ 0.5
GABPA-203ENST00000487266 SPDYE3A6NKU9 549 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 FIBPO43427 364 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 EPB41L2O43491 1005 aaKnown RBP18.19■□□□□ 0.5
GABPA-203ENST00000487266 STAM2O75886 525 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 TGFB3P10600 412 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 ITGB5P18084 799 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 ADCY7P51828 1080 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 KIAA0753Q2KHM9 967 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 PPP1R18Q6NYC8 613 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 ZNF365Q70YC5 407 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 VWCEQ96DN2 955 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 FAM161BQ96MY7 647 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 RIC8AQ9NPQ8 531 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 HDAC6Q9UBN7 1215 aa18.19■□□□□ 0.5
GABPA-203ENST00000487266 SMCO2A6NFE2 343 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 ATP9AO75110 1047 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 PDIA3P30101 505 aaKnown RBP18.18■□□□□ 0.5
GABPA-203ENST00000487266 HIC1Q14526 733 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 PKN1Q16512 942 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 PTGISQ16647 500 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 PFKFB3Q16875 520 aaPredicted RBP18.18■□□□□ 0.5
GABPA-203ENST00000487266 TRIM50Q86XT4 487 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 C16orf70Q9BSU1 422 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 IL23AQ9NPF7 189 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 CYP46A1Q9Y6A2 500 aa18.18■□□□□ 0.5
GABPA-203ENST00000487266 TET1Q8NFU7 2136 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 HAS3O00219 553 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 LGALS2P05162 132 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 SUPT20HL2P0C7V6 817 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 SCG2P13521 617 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 ZNF200P98182 395 aaPredicted RBP18.17■□□□□ 0.5
GABPA-203ENST00000487266 PTPN11Q06124 597 aaPredicted RBP18.17■□□□□ 0.5
GABPA-203ENST00000487266 NTRK3Q16288 839 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 GPR153Q6NV75 609 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 PSRC1Q6PGN9 363 aaPredicted RBP18.17■□□□□ 0.5
GABPA-203ENST00000487266 METTL7BQ6UX53 244 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 SESTD1Q86VW0 696 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 DHX38Q92620 1227 aaKnown RBP18.17■□□□□ 0.5
GABPA-203ENST00000487266 GPR20Q99678 358 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 ANO3Q9BYT9 981 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 CXXC1Q9P0U4 656 aaPredicted RBP18.17■□□□□ 0.5
GABPA-203ENST00000487266 GTF2IRD1Q9UHL9 959 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 NOD1Q9Y239 953 aa18.17■□□□□ 0.5
GABPA-203ENST00000487266 CCDC196A0A1B0GTZ2 297 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 GRXCR1A8MXD5 290 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms