RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 DHX38Q92620 1227 aaKnown RBP28.38■■■□□ 2.13
LIME1-206ENST00000487026 RRP36Q96EU6 259 aaKnown RBP28.38■■■□□ 2.13
LIME1-206ENST00000487026 ANO2Q9NQ90 1003 aa28.38■■■□□ 2.13
LIME1-206ENST00000487026 GTF2IRD1Q9UHL9 959 aa28.38■■■□□ 2.13
LIME1-206ENST00000487026 MYO9BQ13459 2157 aa28.38■■■□□ 2.13
LIME1-206ENST00000487026 CCDC69A6NI79 296 aa28.37■■■□□ 2.13
LIME1-206ENST00000487026 PLEKHA8P1O95397 391 aa28.37■■■□□ 2.13
LIME1-206ENST00000487026 UBA1P22314 1058 aaKnown RBP28.37■■■□□ 2.13
LIME1-206ENST00000487026 KIF5BP33176 963 aa28.37■■■□□ 2.13
LIME1-206ENST00000487026 NECTIN1Q15223 517 aa28.37■■■□□ 2.13
LIME1-206ENST00000487026 PPM1EQ8WY54 764 aa28.37■■■□□ 2.13
LIME1-206ENST00000487026 GAS2L1Q99501 681 aaPredicted RBP28.37■■■□□ 2.13
LIME1-206ENST00000487026 SPZ1Q9BXG8 430 aa28.37■■■□□ 2.13
LIME1-206ENST00000487026 LRRC2Q9BYS8 371 aa28.37■■■□□ 2.13
LIME1-206ENST00000487026 TRIP12Q14669 1992 aaPredicted RBP28.37■■■□□ 2.13
LIME1-206ENST00000487026 PPFIA4O75335 1185 aa28.36■■■□□ 2.13
LIME1-206ENST00000487026 ACTN1P12814 892 aa28.36■■■□□ 2.13
LIME1-206ENST00000487026 MRPS9P82933 396 aaKnown RBP28.36■■■□□ 2.13
LIME1-206ENST00000487026 USP17L6PQ6QN14 398 aa28.36■■■□□ 2.13
LIME1-206ENST00000487026 SRBD1Q8N5C6 995 aaKnown RBP28.36■■■□□ 2.13
LIME1-206ENST00000487026 KATNAL1Q9BW62 490 aa28.36■■■□□ 2.13
LIME1-206ENST00000487026 RTEL1Q9NZ71 1219 aa28.36■■■□□ 2.13
LIME1-206ENST00000487026 HAS3O00219 553 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 F2P00734 622 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 TGFB3P10600 412 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 ZNF200P98182 395 aaPredicted RBP28.35■■■□□ 2.13
LIME1-206ENST00000487026 ADGRE1Q14246 886 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 TMTC2Q8N394 836 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 CCDC155Q8N6L0 562 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 CAGE1Q8TC20 777 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 TMEM87BQ96K49 555 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 MTA3Q9BTC8 594 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 MLXIPQ9HAP2 919 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 PCDHA11Q9Y5I1 949 aa28.35■■■□□ 2.13
LIME1-206ENST00000487026 HOXD8P13378 290 aaPredicted RBP28.34■■■□□ 2.13
LIME1-206ENST00000487026 GPNMBQ14956 572 aa28.34■■■□□ 2.13
LIME1-206ENST00000487026 AFAP1L1Q8TED9 768 aa28.34■■■□□ 2.13
LIME1-206ENST00000487026 LZTS2Q9BRK4 669 aa28.34■■■□□ 2.13
LIME1-206ENST00000487026 TET1Q8NFU7 2136 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 SELPP16109 830 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 SMARCA1P28370 1054 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 HIC1Q14526 733 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 PPP2R2DQ66LE6 453 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 CCDC82Q8N4S0 544 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 SMARCC2Q8TAQ2 1214 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 SEC63Q9UGP8 760 aaKnown RBP28.33■■■□□ 2.13
LIME1-206ENST00000487026 VCANP13611 3396 aa28.33■■■□□ 2.13
LIME1-206ENST00000487026 hCG_1642624A0A1W2PR95 340 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 CKBP12277 381 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 IGFBP4P22692 258 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 LIFRP42702 1097 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 GNAQP50148 359 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 LRRC8DQ7L1W4 858 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 WNT8BQ93098 351 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 C16orf70Q9BSU1 422 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 PRDM6Q9NQX0 595 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 FRMPD4Q14CM0 1322 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 TANC1Q9C0D5 1861 aa28.32■■■□□ 2.12
LIME1-206ENST00000487026 MEIS2O14770 477 aa28.31■■■□□ 2.12
LIME1-206ENST00000487026 SEMA3FQ13275 785 aa28.31■■■□□ 2.12
LIME1-206ENST00000487026 CCDC85BQ15834 202 aaPredicted RBP28.31■■■□□ 2.12
LIME1-206ENST00000487026 BMP2KLQ5H9B9 411 aa28.31■■■□□ 2.12
LIME1-206ENST00000487026 CENPQQ7L2Z9 268 aaPredicted RBP28.31■■■□□ 2.12
LIME1-206ENST00000487026 CUL5Q93034 780 aa28.31■■■□□ 2.12
LIME1-206ENST00000487026 INPP4AQ96PE3 977 aaPredicted RBP28.31■■■□□ 2.12
LIME1-206ENST00000487026 CHD7Q9P2D1 2997 aa28.31■■■□□ 2.12
LIME1-206ENST00000487026 SPATA31C2B4DYI2 1134 aa28.3■■■□□ 2.12
LIME1-206ENST00000487026 CA3P07451 260 aa28.3■■■□□ 2.12
LIME1-206ENST00000487026 GNPTABQ3T906 1256 aa28.3■■■□□ 2.12
LIME1-206ENST00000487026 CYFIP1Q7L576 1253 aa28.3■■■□□ 2.12
LIME1-206ENST00000487026 SLC12A7Q9Y666 1083 aa28.3■■■□□ 2.12
LIME1-206ENST00000487026 NBNO60934 754 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 CALM1P0DP23 149 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 CALM2P0DP24 149 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 CALM3P0DP25 149 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 ICAM3P32942 547 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 PTK7Q13308 1070 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 TRIM71Q2Q1W2 868 aaKnown RBP28.29■■■□□ 2.12
LIME1-206ENST00000487026 SLC9A7Q96T83 725 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 TELO2Q9Y4R8 837 aa28.29■■■□□ 2.12
LIME1-206ENST00000487026 PIK3CDO00329 1044 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 STAM2O75886 525 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 RBL2Q08999 1139 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 TCTN1Q2MV58 587 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 ZNF618Q5T7W0 954 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 HERC6Q8IVU3 1022 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 FANCBQ8NB91 859 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 PHOSPHO2Q8TCD6 241 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 CERS4Q9HA82 394 aa28.28■■■□□ 2.12
LIME1-206ENST00000487026 H3BRB1 525 aa28.27■■■□□ 2.12
LIME1-206ENST00000487026 NOP56O00567 594 aaKnown RBP28.27■■■□□ 2.12
LIME1-206ENST00000487026 LGALS2P05162 132 aa28.27■■■□□ 2.12
LIME1-206ENST00000487026 PCNX4Q63HM2 1172 aa28.27■■■□□ 2.12
LIME1-206ENST00000487026 TMCO2Q7Z6W1 182 aaPredicted RBP28.27■■■□□ 2.12
LIME1-206ENST00000487026 TUT1Q9H6E5 874 aaKnown RBP28.27■■■□□ 2.12
LIME1-206ENST00000487026 PSTPIP2Q9H939 334 aa28.27■■■□□ 2.12
LIME1-206ENST00000487026 RFXAPO00287 272 aa28.26■■■□□ 2.11
LIME1-206ENST00000487026 FIBPO43427 364 aa28.26■■■□□ 2.11
LIME1-206ENST00000487026 BAIAP3O94812 1187 aa28.26■■■□□ 2.11
LIME1-206ENST00000487026 KCNJ6P48051 423 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms