RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ZNF76P36508 570 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 PRPHP41219 470 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 PRMT2P55345 433 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 CEBPZQ03701 1054 aaKnown RBP10.85□□□□□ -0.67
MCF2L-227ENST00000486806 PTGDRQ13258 359 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 CALCRLQ16602 461 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 GNPTABQ3T906 1256 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 ARL6IP4Q66PJ3 421 aaKnown RBP10.85□□□□□ -0.67
MCF2L-227ENST00000486806 OTOP1Q7RTM1 612 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 NLRX1Q86UT6 975 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 PLA2G4DQ86XP0 818 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 KCNG4Q8TDN1 519 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 TRIB2Q92519 343 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 SCAND2PQ9GZW5 306 aaPredicted RBP10.85□□□□□ -0.67
MCF2L-227ENST00000486806 AGO4Q9HCK5 861 aaKnown RBP10.85□□□□□ -0.67
MCF2L-227ENST00000486806 VTA1Q9NP79 307 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 KCNH7Q9NS40 1196 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 RCOR1Q9UKL0 485 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 RBM47A0AV96 593 aaKnown RBP10.84□□□□□ -0.67
MCF2L-227ENST00000486806 SPATA31C2B4DYI2 1134 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 SPTLC2O15270 562 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 MAFGO15525 162 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 KCNA2P16389 499 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 ITGB3BPQ13352 177 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-227ENST00000486806 STK38Q15208 465 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 IL17AQ16552 155 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 TAPT1Q6NXT6 567 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 B3GNT9Q6UX72 402 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 TRMT44Q8IYL2 757 aaKnown RBP10.84□□□□□ -0.67
MCF2L-227ENST00000486806 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 SLC5A5Q92911 643 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 CDHR1Q96JP9 859 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 SPATA32Q96LK8 384 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 FAM20AQ96MK3 541 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 GBP4Q96PP9 640 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 ABHD16BQ9H3Z7 469 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 GDPD2Q9HCC8 539 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 NRBP1Q9UHY1 535 aa10.84□□□□□ -0.67
MCF2L-227ENST00000486806 FBXO2Q9UK22 296 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-227ENST00000486806 IPO5O00410 1097 aaKnown RBP10.83□□□□□ -0.68
MCF2L-227ENST00000486806 DHX15O43143 795 aaKnown RBP10.83□□□□□ -0.68
MCF2L-227ENST00000486806 ATP9AO75110 1047 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 PSMD10O75832 226 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 ARIH2O95376 493 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 ZNF865P0CJ78 1059 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-227ENST00000486806 CYBAP13498 195 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 UBA1P22314 1058 aaKnown RBP10.83□□□□□ -0.68
MCF2L-227ENST00000486806 CYP2C19P33261 490 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
MCF2L-227ENST00000486806 GRIN1Q05586 938 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 SPIRE1Q08AE8 756 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 CCDC62Q6P9F0 684 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 EEPD1Q7L9B9 569 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 SLFN12Q8IYM2 578 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 GJA10Q969M2 543 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 FERMT2Q96AC1 680 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 RIT2Q99578 217 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 SENP7Q9BQF6 1050 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 ZNF577Q9BSK1 485 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 VAV3Q9UKW4 847 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 TRIM17Q9Y577 477 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
MCF2L-227ENST00000486806 NFASCO94856 1347 aa10.83□□□□□ -0.68
MCF2L-227ENST00000486806 ADCY3O60266 1144 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 HMGCRP04035 888 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 TGFB3P10600 412 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 ELNP15502 786 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 MARCKSP29966 332 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-227ENST00000486806 CTCFP49711 727 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-227ENST00000486806 SP2Q02086 613 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 AXDND1Q5T1B0 1012 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-227ENST00000486806 MAP3K21Q5TCX8 1036 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 KCNV1Q6PIU1 500 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 SEPT14Q6ZU15 432 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 IGSF22Q8N9C0 903 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 KRI1Q8N9T8 703 aaKnown RBP10.82□□□□□ -0.68
MCF2L-227ENST00000486806 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 TRPV1Q8NER1 839 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 RAET1EQ8TD07 263 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 SCFD2Q8WU76 684 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 PDGFCQ9NRA1 345 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 DDX41Q9UJV9 622 aaKnown RBP10.82□□□□□ -0.68
MCF2L-227ENST00000486806 ZHX1Q9UKY1 873 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-227ENST00000486806 PCDHA7Q9UN72 937 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 PTCH2Q9Y6C5 1203 aa10.82□□□□□ -0.68
MCF2L-227ENST00000486806 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-227ENST00000486806 ADCY6O43306 1168 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 ADCYAP1R1P41586 468 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 TXKP42681 527 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 LBX1P52954 281 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 TRIM32Q13049 653 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 PPP2R5CQ13362 524 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 TTLL4Q14679 1199 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 CSPP1Q1MSJ5 1256 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 TMEM63BQ5T3F8 832 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 LRCH2Q5VUJ6 765 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 MFSD14CQ5VZR4 134 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms