RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 CASC1Q6TDU7 716 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 CTCFLQ8NI51 663 aaPredicted RBP25.92■■□□□ 1.74
SREBF1-214ENST00000486311 SLC9A7Q96T83 725 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 ESYT1Q9BSJ8 1104 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 SPTBN5Q9NRC6 3674 aaKnown RBP25.92■■□□□ 1.74
SREBF1-214ENST00000486311 CHD7Q9P2D1 2997 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 MYH6P13533 1939 aa25.91■■□□□ 1.74
SREBF1-214ENST00000486311 SELPP16109 830 aa25.91■■□□□ 1.74
SREBF1-214ENST00000486311 MCM5P33992 734 aa25.91■■□□□ 1.74
SREBF1-214ENST00000486311 PIBF1Q8WXW3 757 aa25.91■■□□□ 1.74
SREBF1-214ENST00000486311 ZFP91Q96JP5 570 aaPredicted RBP25.91■■□□□ 1.74
SREBF1-214ENST00000486311 LZTS2Q9BRK4 669 aa25.91■■□□□ 1.74
SREBF1-214ENST00000486311 MYL10Q9BUA6 226 aa25.91■■□□□ 1.74
SREBF1-214ENST00000486311 KIAA1217Q5T5P2 1943 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 SH2B2O14492 632 aaPredicted RBP25.9■■□□□ 1.74
SREBF1-214ENST00000486311 SLC27A2O14975 620 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 SORBS3O60504 671 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 STAM2O75886 525 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 BAIAP3O94812 1187 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 GPNMBQ14956 572 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 LRRC8DQ7L1W4 858 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 TMTC2Q8N394 836 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 GPKOWQ92917 476 aaPredicted RBP eCLIP25.9■■□□□ 1.74
SREBF1-214ENST00000486311 RRP36Q96EU6 259 aaKnown RBP25.9■■□□□ 1.74
SREBF1-214ENST00000486311 TMEM87BQ96K49 555 aa25.9■■□□□ 1.74
SREBF1-214ENST00000486311 GBF1Q92538 1859 aa25.89■■□□□ 1.74
SREBF1-214ENST00000486311 PARNO95453 639 aaKnown RBP25.89■■□□□ 1.74
SREBF1-214ENST00000486311 CKBP12277 381 aa25.89■■□□□ 1.74
SREBF1-214ENST00000486311 GNAQP50148 359 aa25.89■■□□□ 1.74
SREBF1-214ENST00000486311 MRPS9P82933 396 aaKnown RBP25.89■■□□□ 1.74
SREBF1-214ENST00000486311 PTK7Q13308 1070 aa25.89■■□□□ 1.74
SREBF1-214ENST00000486311 GNPTABQ3T906 1256 aa25.89■■□□□ 1.74
SREBF1-214ENST00000486311 INPP4AQ96PE3 977 aaPredicted RBP25.89■■□□□ 1.74
SREBF1-214ENST00000486311 MLXIPQ9HAP2 919 aa25.89■■□□□ 1.74
SREBF1-214ENST00000486311 ICAM3P32942 547 aa25.88■■□□□ 1.73
SREBF1-214ENST00000486311 NECTIN1Q15223 517 aa25.88■■□□□ 1.73
SREBF1-214ENST00000486311 NFXL1Q6ZNB6 911 aa25.88■■□□□ 1.73
SREBF1-214ENST00000486311 C16orf70Q9BSU1 422 aa25.88■■□□□ 1.73
SREBF1-214ENST00000486311 PIK3CDO00329 1044 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 CXCL10P02778 98 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 CA3P07451 260 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 IGFBP4P22692 258 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 LIFRP42702 1097 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 COL9A3Q14050 684 aaPredicted RBP25.87■■□□□ 1.73
SREBF1-214ENST00000486311 TRIM71Q2Q1W2 868 aaKnown RBP25.87■■□□□ 1.73
SREBF1-214ENST00000486311 CREB3L3Q68CJ9 461 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 HERC6Q8IVU3 1022 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 PPM1EQ8WY54 764 aa25.87■■□□□ 1.73
SREBF1-214ENST00000486311 SEC63Q9UGP8 760 aaKnown RBP25.87■■□□□ 1.73
SREBF1-214ENST00000486311 TANC1Q9C0D5 1861 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 CCDC69A6NI79 296 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 SPATA31C2B4DYI2 1134 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 PLEKHA8P1O95397 391 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 SRBD1Q8N5C6 995 aaKnown RBP25.86■■□□□ 1.73
SREBF1-214ENST00000486311 SMARCC2Q8TAQ2 1214 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 CUL5Q93034 780 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 PRDM6Q9NQX0 595 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 SCN5AQ14524 2016 aa25.86■■□□□ 1.73
SREBF1-214ENST00000486311 BAZ2BQ9UIF8 2168 aaKnown RBP25.86■■□□□ 1.73
SREBF1-214ENST00000486311 MEIS2O14770 477 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 NBNO60934 754 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 CALM1P0DP23 149 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 CALM2P0DP24 149 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 CALM3P0DP25 149 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 ZNF200P98182 395 aaPredicted RBP25.85■■□□□ 1.73
SREBF1-214ENST00000486311 SEMA3FQ13275 785 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 NEDD9Q14511 834 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 HIC1Q14526 733 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 XRRA1Q6P2D8 792 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 CNKSR3Q6P9H4 555 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 TRAF7Q6Q0C0 670 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 USP17L6PQ6QN14 398 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 METTL7BQ6UX53 244 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 SYMPKQ92797 1274 aaKnown RBP25.85■■□□□ 1.73
SREBF1-214ENST00000486311 WNT8BQ93098 351 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 BCAS3Q9H6U6 928 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 ANO2Q9NQ90 1003 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 TTC28Q96AY4 2481 aa25.85■■□□□ 1.73
SREBF1-214ENST00000486311 KIF28PB7ZC32 967 aa25.84■■□□□ 1.73
SREBF1-214ENST00000486311 FIBPO43427 364 aa25.84■■□□□ 1.73
SREBF1-214ENST00000486311 KCNJ6P48051 423 aa25.84■■□□□ 1.73
SREBF1-214ENST00000486311 BMP2KLQ5H9B9 411 aa25.84■■□□□ 1.73
SREBF1-214ENST00000486311 TJAP1Q5JTD0 557 aa25.84■■□□□ 1.73
SREBF1-214ENST00000486311 RTEL1Q9NZ71 1219 aa25.84■■□□□ 1.73
SREBF1-214ENST00000486311 H3BRB1 525 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 LGALS2P05162 132 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 RXRAP19793 462 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 HOXC8P31273 242 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 WDR5P61964 334 aaKnown RBP25.83■■□□□ 1.73
SREBF1-214ENST00000486311 ZNF618Q5T7W0 954 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 PCNX4Q63HM2 1172 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 SERINC5Q86VE9 423 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 TUT1Q9H6E5 874 aaKnown RBP25.83■■□□□ 1.73
SREBF1-214ENST00000486311 SLC12A7Q9Y666 1083 aa25.83■■□□□ 1.73
SREBF1-214ENST00000486311 MYO9BQ13459 2157 aa25.82■■□□□ 1.72
SREBF1-214ENST00000486311 NOP56O00567 594 aaKnown RBP25.82■■□□□ 1.72
SREBF1-214ENST00000486311 TAP1Q03518 808 aa25.82■■□□□ 1.72
SREBF1-214ENST00000486311 CCDC85BQ15834 202 aaPredicted RBP25.82■■□□□ 1.72
SREBF1-214ENST00000486311 CYFIP1Q7L576 1253 aa25.82■■□□□ 1.72
SREBF1-214ENST00000486311 SGMS1Q86VZ5 419 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms