RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 WDR11Q9BZH6 1224 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 NOD1Q9Y239 953 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 BAHCC1Q9P281 2608 aa9.92□□□□□ -0.82
XRN1-212ENST00000486211 TPRP12270 2363 aaKnown RBP9.92□□□□□ -0.82
XRN1-212ENST00000486211 BAZ2AQ9UIF9 1905 aaKnown RBP9.92□□□□□ -0.82
XRN1-212ENST00000486211 DMXL1Q9Y485 3027 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 RBM47A0AV96 593 aaKnown RBP9.91□□□□□ -0.82
XRN1-212ENST00000486211 A6NJR5 290 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 GNAI3P08754 354 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 LINC00271P0C7V0 271 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 CKBP12277 381 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 PDE6AP16499 860 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 GGCXP38435 758 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 PTGDRQ13258 359 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 GDF6Q6KF10 455 aaPredicted RBP9.91□□□□□ -0.82
XRN1-212ENST00000486211 DGLUCYQ7Z3D6 616 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 SESTD1Q86VW0 696 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 OR6J1Q8NGC5 347 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
XRN1-212ENST00000486211 SMC4Q9NTJ3 1288 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 RNF146Q9NTX7 359 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 RALGAPA2Q2PPJ7 1873 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 ZNF292O60281 2723 aa9.91□□□□□ -0.82
XRN1-212ENST00000486211 TCRBV5S4A2TA0A5A2 114 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 NRG2O14511 850 aaPredicted RBP9.9□□□□□ -0.82
XRN1-212ENST00000486211 PRKAB2O43741 272 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 KPNA6O60684 536 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 LGR5O75473 907 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 ICAM3P32942 547 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 ADAM15Q13444 863 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 TRIM71Q2Q1W2 868 aaKnown RBP9.9□□□□□ -0.82
XRN1-212ENST00000486211 MYOCDQ8IZQ8 938 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 SMRP1Q8NCR6 262 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 CYP39A1Q9NYL5 469 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 CLEC1BQ9P126 229 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 NYAP2Q9P242 653 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 FEM1BQ9UK73 627 aa9.9□□□□□ -0.82
XRN1-212ENST00000486211 NOB1Q9ULX3 412 aaKnown RBP9.9□□□□□ -0.82
XRN1-212ENST00000486211 CTDP1Q9Y5B0 961 aaPredicted RBP9.9□□□□□ -0.82
XRN1-212ENST00000486211 ZNF532Q9HCE3 1301 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 C5orf67F2Z3F1 127 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 GRM6O15303 877 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 AMHP03971 560 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 RRP1P56182 461 aaKnown RBP9.89□□□□□ -0.83
XRN1-212ENST00000486211 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 MUM1L1Q5H9M0 696 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 TMEM105Q8N8V8 129 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 WNT8BQ93098 351 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 EAF2Q96CJ1 260 aaPredicted RBP9.89□□□□□ -0.83
XRN1-212ENST00000486211 RIPOR3Q96MK2 946 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 TRERF1Q96PN7 1200 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 API5Q9BZZ5 524 aaKnown RBP9.89□□□□□ -0.83
XRN1-212ENST00000486211 LMAN2LQ9H0V9 348 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 CCDC8Q9H0W5 538 aaPredicted RBP9.89□□□□□ -0.83
XRN1-212ENST00000486211 ARMT1Q9H993 441 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 ACACBO00763 2458 aa9.89□□□□□ -0.83
XRN1-212ENST00000486211 IGKV6D-41A0A0C4DH26 115 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 COASYQ13057 564 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 TKFCQ3LXA3 575 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 ZNF618Q5T7W0 954 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 SLC9C2Q5TAH2 1124 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 SMYD5Q6GMV2 418 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 DBF4BQ8NFT6 615 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 KAT2BQ92831 832 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 COPS5Q92905 334 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 TOP1MTQ969P6 601 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 YME1L1Q96TA2 773 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 PRR14Q9BWN1 585 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 IGFLR1Q9H665 355 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 INCENPQ9NQS7 918 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 ATP8A2Q9NTI2 1148 aa9.88□□□□□ -0.83
XRN1-212ENST00000486211 CFAP47Q6ZTR5 3102 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 ZBED9Q6R2W3 1325 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 RAD50Q92878 1312 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 LCE2BO14633 110 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 NKRFO15226 690 aaKnown RBP eCLIP9.87□□□□□ -0.83
XRN1-212ENST00000486211 FDX1P10109 184 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 NDUFV1P49821 464 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 ALDH5A1P51649 535 aaPredicted RBP9.87□□□□□ -0.83
XRN1-212ENST00000486211 CAMK1Q14012 370 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 BRDTQ58F21 947 aaPredicted RBP9.87□□□□□ -0.83
XRN1-212ENST00000486211 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
XRN1-212ENST00000486211 LRRC47Q8N1G4 583 aaKnown RBP9.87□□□□□ -0.83
XRN1-212ENST00000486211 TMUB1Q9BVT8 246 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 PHF7Q9BWX1 381 aaPredicted RBP9.87□□□□□ -0.83
XRN1-212ENST00000486211 GTF2IRD1Q9UHL9 959 aa9.87□□□□□ -0.83
XRN1-212ENST00000486211 USP15Q9Y4E8 981 aaPredicted RBP9.87□□□□□ -0.83
XRN1-212ENST00000486211 EP300Q09472 2414 aaPredicted RBP9.86□□□□□ -0.83
XRN1-212ENST00000486211 MYH4Q9Y623 1939 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.86□□□□□ -0.83
XRN1-212ENST00000486211 MBD4O95243 580 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 GLP2RO95838 553 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 GNAI2P04899 355 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 RB1P06400 928 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 ALAS1P13196 640 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 RASA1P20936 1047 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 CTNNB1P35222 781 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 CHMP4BP1P59074 171 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms