RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 CCDC178Q5BJE1 867 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 GDPD5Q8WTR4 605 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 SCFD2Q8WU76 684 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 DHX38Q92620 1227 aaKnown RBP20.41■□□□□ 0.86
MCF2L-226ENST00000486210 LY9Q9HBG7 655 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 HCN4Q9Y3Q4 1203 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 CYP46A1Q9Y6A2 500 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 KIAA1217Q5T5P2 1943 aa20.41■□□□□ 0.86
MCF2L-226ENST00000486210 PDHBP11177 359 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 WTAPQ15007 396 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 PTGISQ16647 500 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 IFIT1BQ5T764 474 aaKnown RBP20.4■□□□□ 0.86
MCF2L-226ENST00000486210 GDF6Q6KF10 455 aaPredicted RBP20.4■□□□□ 0.86
MCF2L-226ENST00000486210 Q6ZUG5 572 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 WDR19Q8NEZ3 1342 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 DNERQ8NFT8 737 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 TMEM87BQ96K49 555 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 NOD1Q9Y239 953 aa20.4■□□□□ 0.86
MCF2L-226ENST00000486210 ERICH2A1L162 156 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 FAM86C2PA6NEL3 165 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 GPR37L1O60883 481 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 KCNJ6P48051 423 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 SART3Q15020 963 aaKnown RBP20.39■□□□□ 0.85
MCF2L-226ENST00000486210 GPATCH4Q5T3I0 446 aaKnown RBP20.39■□□□□ 0.85
MCF2L-226ENST00000486210 CAGE1Q8TC20 777 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 AFAP1L1Q8TED9 768 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 KAT2BQ92831 832 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 MTA3Q9BTC8 594 aa20.39■□□□□ 0.85
MCF2L-226ENST00000486210 B4DLN1 442 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 MMP3P08254 477 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 MRPL12P52815 198 aaKnown RBP20.38■□□□□ 0.85
MCF2L-226ENST00000486210 CHMP4BP1P59074 171 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 ZNF543Q08ER8 600 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 CCDC62Q6P9F0 684 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 SESTD1Q86VW0 696 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 KAT14Q9H8E8 782 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 PDRG1Q9NUG6 133 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 LMCD1Q9NZU5 365 aa20.38■□□□□ 0.85
MCF2L-226ENST00000486210 PI4K2BG5E9Z4 385 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 NBNO60934 754 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 CXCL10P02778 98 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 SNHG28P0DPA3 235 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 RBL2Q08999 1139 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 TOB2Q14106 344 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-226ENST00000486210 LRRC8DQ7L1W4 858 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 PNMA1Q8ND90 353 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 AFG1LQ8WV93 481 aa20.37■□□□□ 0.85
MCF2L-226ENST00000486210 SELPP16109 830 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 LIFRP42702 1097 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 LY6KQ17RY6 165 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 CNKSR3Q6P9H4 555 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 CCDC155Q8N6L0 562 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 TBC1D5Q92609 795 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
MCF2L-226ENST00000486210 AGXT2Q9BYV1 514 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 BRPF3Q9ULD4 1205 aa20.36■□□□□ 0.85
MCF2L-226ENST00000486210 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.35■□□□□ 0.85
MCF2L-226ENST00000486210 GJB5O95377 273 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 NEK4P51957 841 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 ERVK-21P61565 698 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 ARHGAP1Q07960 439 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 APOBRQ0VD83 1088 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 NFXL1Q6ZNB6 911 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 SGMS1Q86VZ5 419 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 RAB11FIP4Q86YS3 637 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 BRF1Q92994 677 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 ZBED2Q9BTP6 218 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 MYL10Q9BUA6 226 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 GTF2IRD1Q9UHL9 959 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 MTUS1Q9ULD2 1270 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 MYH7BA7E2Y1 1941 aa20.35■□□□□ 0.85
MCF2L-226ENST00000486210 LINC01553A4QN01 128 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 CKBP12277 381 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 FGD1P98174 961 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 USH1GQ495M9 461 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 TRAF7Q6Q0C0 670 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 FBXL16Q8N461 479 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 CPVLQ9H3G5 476 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 UBE2ZQ9H832 354 aaPredicted RBP20.34■□□□□ 0.85
MCF2L-226ENST00000486210 COL20A1Q9P218 1284 aa20.34■□□□□ 0.85
MCF2L-226ENST00000486210 MICAL3Q7RTP6 2002 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 CCDC69A6NI79 296 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 GH1P01241 217 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 AK2P54819 239 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 RABEP1Q15276 862 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 SEPT14Q6ZU15 432 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 ZNF654Q8IZM8 581 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 TMTC2Q8N394 836 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 RGS22Q8NE09 1264 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.33■□□□□ 0.85
MCF2L-226ENST00000486210 WNT8BQ93098 351 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 TGS1Q96RS0 853 aaKnown RBP20.33■□□□□ 0.85
MCF2L-226ENST00000486210 RAD9AQ99638 391 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 HDAC6Q9UBN7 1215 aa20.33■□□□□ 0.85
MCF2L-226ENST00000486210 MYH6P13533 1939 aa20.33■□□□□ 0.84
MCF2L-226ENST00000486210 KLF18A0A0U1RQI7 1052 aa20.32■□□□□ 0.84
MCF2L-226ENST00000486210 ABHD14A-ACY1A0A1B0GW23 586 aa20.32■□□□□ 0.84
MCF2L-226ENST00000486210 DHX16O60231 1041 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms