RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 HSD17B4P51659 736 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 GHRHRQ02643 423 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 C8orf34Q49A92 452 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 NFRKBQ6P4R8 1299 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 IL17RAQ96F46 866 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 IWS1Q96ST2 819 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 UHRF1Q96T88 793 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 RMDN3Q96TC7 470 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 FAM217BQ9NTX9 383 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOA-204ENST00000485901 LCTP09848 1927 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 OPLAHO14841 1288 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 PARNO95453 639 aaKnown RBP13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 IGFBP4P22692 258 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 PDIA3P30101 505 aaKnown RBP13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 CDC27P30260 824 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 PDE4DQ08499 809 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 TOB2Q14106 344 aaPredicted RBP13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 ARHGEF16Q5VV41 709 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 PPP2R2DQ66LE6 453 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 OTOP2Q7RTS6 562 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 ZNF274Q96GC6 653 aaPredicted RBP13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 SLC9A7Q96T83 725 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 C1QTNF1Q9BXJ1 281 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 NKX2-4Q9H2Z4 354 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 COG5Q9UP83 839 aa13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 BAZ2BQ9UIF8 2168 aaKnown RBP13.8□□□□□ -0.2
HLA-DOA-204ENST00000485901 XIRP2A4UGR9 3374 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 hCG_1642624A0A1W2PR95 340 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 KIF28PB7ZC32 967 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 GTPBP6O43824 516 aaPredicted RBP13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 EDNRBP24530 442 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 CCL23P55773 120 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 PURAQ00577 322 aaKnown RBP13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 FUT2Q10981 343 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 CUL5Q93034 780 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 MTG1Q9BT17 334 aaPredicted RBP13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 WDR11Q9BZH6 1224 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 TRPV6Q9H1D0 765 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 COL20A1Q9P218 1284 aa13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 YBX2Q9Y2T7 364 aaKnown RBP13.79□□□□□ -0.2
HLA-DOA-204ENST00000485901 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 BRWD1Q9NSI6 2320 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 A6NJR5 290 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 BAIAP3O94812 1187 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 BMP1P13497 986 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 CCT2P78371 535 aaKnown RBP13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 BFSP2Q13515 415 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 STXBP2Q15833 593 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 HEATR3Q7Z4Q2 680 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 FBXO16Q8IX29 292 aaPredicted RBP13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 PXMP2Q9NR77 195 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 LMCD1Q9NZU5 365 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 CNTNAP5Q8WYK1 1306 aa13.78□□□□□ -0.2
HLA-DOA-204ENST00000485901 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 PIK3CDO00329 1044 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 PRPF3O43395 683 aaKnown RBP13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 REV3LO60673 3130 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 EIF3JO75822 258 aaKnown RBP13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 NR3C2P08235 984 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 MYH6P13533 1939 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 EIF2AK2P19525 551 aaKnown RBP13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 AKAP17AQ02040 695 aaKnown RBP13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 NID2Q14112 1375 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 UMODL1Q5DID0 1318 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 FCHSD1Q86WN1 690 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 RETREG2Q8NC44 543 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 PPM1EQ8WY54 764 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 VWCEQ96DN2 955 aa13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 LARP6Q9BRS8 491 aaKnown RBP13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 TCF20Q9UGU0 1960 aaKnown RBP13.77□□□□□ -0.21
HLA-DOA-204ENST00000485901 TET1Q8NFU7 2136 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 CPLX1O14810 134 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 IFNAR1P17181 557 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 NEK4P51957 841 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 PFKFB3Q16875 520 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 CPLX2Q6PUV4 134 aaKnown RBP13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 SESTD1Q86VW0 696 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 CCDC155Q8N6L0 562 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 CAGE1Q8TC20 777 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 GLT8D2Q9H1C3 349 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms