RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 GNEQ9Y223 722 aaKnown RBP22.66■■□□□ 1.22
COL6A2-208ENST00000485591 VPS37CA5D8V6 355 aaPredicted RBP22.65■■□□□ 1.22
COL6A2-208ENST00000485591 MAFGO15525 162 aa22.65■■□□□ 1.22
COL6A2-208ENST00000485591 SETQ01105 290 aaPredicted RBP22.65■■□□□ 1.22
COL6A2-208ENST00000485591 TMEM63BQ5T3F8 832 aa22.65■■□□□ 1.22
COL6A2-208ENST00000485591 ANO1Q5XXA6 986 aa22.65■■□□□ 1.22
COL6A2-208ENST00000485591 MCTP1Q6DN14 999 aa22.65■■□□□ 1.22
COL6A2-208ENST00000485591 CYP2W1Q8TAV3 490 aa22.65■■□□□ 1.22
COL6A2-208ENST00000485591 U2AF1L4Q8WU68 220 aaKnown RBP22.65■■□□□ 1.22
COL6A2-208ENST00000485591 NAP1L4Q99733 375 aaKnown RBP22.65■■□□□ 1.22
COL6A2-208ENST00000485591 Q9Y3F1 56 aa22.65■■□□□ 1.22
COL6A2-208ENST00000485591 MYH15Q9Y2K3 1946 aa22.65■■□□□ 1.22
COL6A2-208ENST00000485591 CYP3A7-CYP3A51PA0A087WV96 503 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 SGPL1O95470 568 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 PDIA4P13667 645 aaKnown RBP22.64■■□□□ 1.21
COL6A2-208ENST00000485591 GCFC2P16383 781 aaKnown RBP22.64■■□□□ 1.21
COL6A2-208ENST00000485591 CYP3A7P24462 503 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 GJA8P48165 433 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 LETM2Q2VYF4 491 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 MBOAT7Q96N66 472 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 CRISPLD2Q9H0B8 497 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 XPNPEP3Q9NQH7 507 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 KCNH7Q9NS40 1196 aa22.64■■□□□ 1.21
COL6A2-208ENST00000485591 SYNRGQ9UMZ2 1314 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 STX6O43752 255 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 TDP2O95551 362 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 CAPN2P17655 700 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 UBA1P22314 1058 aaKnown RBP22.63■■□□□ 1.21
COL6A2-208ENST00000485591 LY6KQ17RY6 165 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 GJC2Q5T442 439 aaPredicted RBP22.63■■□□□ 1.21
COL6A2-208ENST00000485591 PPP4R3AQ6IN85 833 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 TLK2Q86UE8 772 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 PLA2G4DQ86XP0 818 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 LENG9Q96B70 501 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 SENP7Q9BQF6 1050 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 UPF3AQ9H1J1 476 aaKnown RBP22.63■■□□□ 1.21
COL6A2-208ENST00000485591 TSHZ2Q9NRE2 1034 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 OGDHLQ9ULD0 1010 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 MTMR6Q9Y217 621 aa22.63■■□□□ 1.21
COL6A2-208ENST00000485591 ADAMTS4O75173 837 aa22.62■■□□□ 1.21
COL6A2-208ENST00000485591 GH1P01241 217 aa22.62■■□□□ 1.21
COL6A2-208ENST00000485591 GJA9P57773 515 aa22.62■■□□□ 1.21
COL6A2-208ENST00000485591 NKX3-2P78367 333 aa22.62■■□□□ 1.21
COL6A2-208ENST00000485591 SP2Q02086 613 aa22.62■■□□□ 1.21
COL6A2-208ENST00000485591 Q4G0T1 1027 aa22.62■■□□□ 1.21
COL6A2-208ENST00000485591 PRR16Q569H4 304 aa22.62■■□□□ 1.21
COL6A2-208ENST00000485591 ARP10275 920 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 KCNA2P16389 499 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 PTGS1P23219 599 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 TRAPPC10P48553 1259 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 ARHGAP1Q07960 439 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 NEDD9Q14511 834 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 BRAPQ7Z569 592 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 GIMAP8Q8ND71 665 aaPredicted RBP22.61■■□□□ 1.21
COL6A2-208ENST00000485591 OR6J1Q8NGC5 347 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 COPS5Q92905 334 aa22.61■■□□□ 1.21
COL6A2-208ENST00000485591 EMID1Q96A84 441 aaPredicted RBP22.61■■□□□ 1.21
COL6A2-208ENST00000485591 AGO4Q9HCK5 861 aaKnown RBP22.61■■□□□ 1.21
COL6A2-208ENST00000485591 DDX25Q9UHL0 483 aaKnown RBP22.61■■□□□ 1.21
COL6A2-208ENST00000485591 NOL7Q9UMY1 257 aaKnown RBP22.61■■□□□ 1.21
COL6A2-208ENST00000485591 CCNT1O60563 726 aaKnown RBP22.6■■□□□ 1.21
COL6A2-208ENST00000485591 GGPS1O95749 300 aa22.6■■□□□ 1.21
COL6A2-208ENST00000485591 PGK1P00558 417 aa22.6■■□□□ 1.21
COL6A2-208ENST00000485591 AP5M1Q9H0R1 490 aa22.6■■□□□ 1.21
COL6A2-208ENST00000485591 SPC25Q9HBM1 224 aa22.6■■□□□ 1.21
COL6A2-208ENST00000485591 KIAA0100Q14667 2235 aaKnown RBP22.59■■□□□ 1.21
COL6A2-208ENST00000485591 POTEFA5A3E0 1075 aa22.59■■□□□ 1.21
COL6A2-208ENST00000485591 CTAGE5O15320 804 aa22.59■■□□□ 1.21
COL6A2-208ENST00000485591 DYNC1LI2O43237 492 aaPredicted RBP22.59■■□□□ 1.21
COL6A2-208ENST00000485591 ATP9AO75110 1047 aa22.59■■□□□ 1.21
COL6A2-208ENST00000485591 CST5P28325 142 aaPredicted RBP22.59■■□□□ 1.21
COL6A2-208ENST00000485591 LAMC2Q13753 1193 aa22.59■■□□□ 1.21
COL6A2-208ENST00000485591 CELF3Q5SZQ8 465 aaKnown RBP22.59■■□□□ 1.21
COL6A2-208ENST00000485591 MYSM1Q5VVJ2 828 aa22.59■■□□□ 1.21
COL6A2-208ENST00000485591 DHX37Q8IY37 1157 aaKnown RBP22.59■■□□□ 1.21
COL6A2-208ENST00000485591 ARRDC4Q8NCT1 418 aa22.59■■□□□ 1.21
COL6A2-208ENST00000485591 NFASCO94856 1347 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 IPO5O00410 1097 aaKnown RBP22.58■■□□□ 1.21
COL6A2-208ENST00000485591 WNT7AO00755 349 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 SLC37A4O43826 429 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 FARP2O94887 1054 aaPredicted RBP22.58■■□□□ 1.21
COL6A2-208ENST00000485591 TFRCP02786 760 aaKnown RBP22.58■■□□□ 1.21
COL6A2-208ENST00000485591 C6orf222P0C671 652 aaPredicted RBP22.58■■□□□ 1.21
COL6A2-208ENST00000485591 RESTQ13127 1097 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 ORC2Q13416 577 aaPredicted RBP22.58■■□□□ 1.21
COL6A2-208ENST00000485591 RILPL1Q5EBL4 403 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 TTC38Q5R3I4 469 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 METTL7BQ6UX53 244 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 RNF180Q86T96 592 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 FERMT3Q86UX7 667 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 ANKLE1Q8NAG6 615 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 KLHDC9Q8NEP7 349 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 ZNF577Q9BSK1 485 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 PKD2L1Q9P0L9 805 aa22.58■■□□□ 1.21
COL6A2-208ENST00000485591 RBM19Q9Y4C8 960 aaKnown RBP22.58■■□□□ 1.21
COL6A2-208ENST00000485591 MYADML2A6NDP7 307 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 CCDC85CA6NKD9 419 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 MSH4O15457 936 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 TOB1P50616 345 aaPredicted RBP22.57■■□□□ 1.2
COL6A2-208ENST00000485591 ITGB3BPQ13352 177 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms