RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ESYT1Q9BSJ8 1104 aa29.71■■■□□ 2.35
HLA-F-227ENST00000485513 HAS3O00219 553 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 PPFIA4O75335 1185 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 MYOGP15173 224 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 UBA1P22314 1058 aaKnown RBP29.7■■■□□ 2.35
HLA-F-227ENST00000485513 MCM5P33992 734 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 SP2Q02086 613 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 KIAA0753Q2KHM9 967 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 HSDL1Q3SXM5 330 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 PPP2R2DQ66LE6 453 aa29.7■■■□□ 2.35
HLA-F-227ENST00000485513 RRP36Q96EU6 259 aaKnown RBP29.7■■■□□ 2.35
HLA-F-227ENST00000485513 SLC27A2O14975 620 aa29.69■■■□□ 2.34
HLA-F-227ENST00000485513 NFXL1Q6ZNB6 911 aa29.69■■■□□ 2.34
HLA-F-227ENST00000485513 TMTC2Q8N394 836 aa29.69■■■□□ 2.34
HLA-F-227ENST00000485513 DHX38Q92620 1227 aaKnown RBP29.69■■■□□ 2.34
HLA-F-227ENST00000485513 GPKOWQ92917 476 aaPredicted RBP eCLIP29.69■■■□□ 2.34
HLA-F-227ENST00000485513 TMEM87BQ96K49 555 aa29.69■■■□□ 2.34
HLA-F-227ENST00000485513 SLC9A7Q96T83 725 aa29.69■■■□□ 2.34
HLA-F-227ENST00000485513 CHD7Q9P2D1 2997 aa29.69■■■□□ 2.34
HLA-F-227ENST00000485513 SH2B2O14492 632 aaPredicted RBP29.68■■■□□ 2.34
HLA-F-227ENST00000485513 SELPP16109 830 aa29.68■■■□□ 2.34
HLA-F-227ENST00000485513 SMARCA1P28370 1054 aa29.68■■■□□ 2.34
HLA-F-227ENST00000485513 RBL2Q08999 1139 aa29.68■■■□□ 2.34
HLA-F-227ENST00000485513 ADGRE1Q14246 886 aa29.68■■■□□ 2.34
HLA-F-227ENST00000485513 LZTS2Q9BRK4 669 aa29.68■■■□□ 2.34
HLA-F-227ENST00000485513 MLXIPQ9HAP2 919 aa29.68■■■□□ 2.34
HLA-F-227ENST00000485513 SEC63Q9UGP8 760 aaKnown RBP29.68■■■□□ 2.34
HLA-F-227ENST00000485513 FRMPD4Q14CM0 1322 aa29.68■■■□□ 2.34
HLA-F-227ENST00000485513 CCDC69A6NI79 296 aa29.67■■■□□ 2.34
HLA-F-227ENST00000485513 GNAQP50148 359 aa29.67■■■□□ 2.34
HLA-F-227ENST00000485513 GNPTABQ3T906 1256 aa29.67■■■□□ 2.34
HLA-F-227ENST00000485513 LRRC8DQ7L1W4 858 aa29.67■■■□□ 2.34
HLA-F-227ENST00000485513 PHOSPHO2Q8TCD6 241 aa29.67■■■□□ 2.34
HLA-F-227ENST00000485513 PPM1EQ8WY54 764 aa29.67■■■□□ 2.34
HLA-F-227ENST00000485513 STAM2O75886 525 aa29.66■■■□□ 2.34
HLA-F-227ENST00000485513 IGFBP4P22692 258 aa29.66■■■□□ 2.34
HLA-F-227ENST00000485513 MRPS9P82933 396 aaKnown RBP29.66■■■□□ 2.34
HLA-F-227ENST00000485513 CREB3L3Q68CJ9 461 aa29.66■■■□□ 2.34
HLA-F-227ENST00000485513 ANO2Q9NQ90 1003 aa29.66■■■□□ 2.34
HLA-F-227ENST00000485513 BAIAP3O94812 1187 aa29.65■■■□□ 2.34
HLA-F-227ENST00000485513 PLEKHA8P1O95397 391 aa29.65■■■□□ 2.34
HLA-F-227ENST00000485513 PARNO95453 639 aaKnown RBP29.65■■■□□ 2.34
HLA-F-227ENST00000485513 CKBP12277 381 aa29.65■■■□□ 2.34
HLA-F-227ENST00000485513 PTK7Q13308 1070 aa29.65■■■□□ 2.34
HLA-F-227ENST00000485513 COL9A3Q14050 684 aaPredicted RBP29.65■■■□□ 2.34
HLA-F-227ENST00000485513 NECTIN1Q15223 517 aa29.65■■■□□ 2.34
HLA-F-227ENST00000485513 SMARCC2Q8TAQ2 1214 aa29.65■■■□□ 2.34
HLA-F-227ENST00000485513 CUL5Q93034 780 aa29.65■■■□□ 2.34
HLA-F-227ENST00000485513 INPP4AQ96PE3 977 aaPredicted RBP29.65■■■□□ 2.34
HLA-F-227ENST00000485513 LIFRP42702 1097 aa29.64■■■□□ 2.34
HLA-F-227ENST00000485513 GPNMBQ14956 572 aa29.64■■■□□ 2.34
HLA-F-227ENST00000485513 USP17L6PQ6QN14 398 aa29.64■■■□□ 2.34
HLA-F-227ENST00000485513 SRBD1Q8N5C6 995 aaKnown RBP29.64■■■□□ 2.34
HLA-F-227ENST00000485513 C16orf70Q9BSU1 422 aa29.64■■■□□ 2.34
HLA-F-227ENST00000485513 CA3P07451 260 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 CALM1P0DP23 149 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 CALM2P0DP24 149 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 CALM3P0DP25 149 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 RXRAP19793 462 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 ICAM3P32942 547 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 ZNF200P98182 395 aaPredicted RBP29.63■■■□□ 2.33
HLA-F-227ENST00000485513 HERC6Q8IVU3 1022 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 RTEL1Q9NZ71 1219 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 VCANP13611 3396 aa29.63■■■□□ 2.33
HLA-F-227ENST00000485513 SPATA31C2B4DYI2 1134 aa29.62■■■□□ 2.33
HLA-F-227ENST00000485513 PIK3CDO00329 1044 aa29.62■■■□□ 2.33
HLA-F-227ENST00000485513 KCNJ6P48051 423 aa29.62■■■□□ 2.33
HLA-F-227ENST00000485513 NEDD9Q14511 834 aa29.62■■■□□ 2.33
HLA-F-227ENST00000485513 BMP2KLQ5H9B9 411 aa29.62■■■□□ 2.33
HLA-F-227ENST00000485513 BCAS3Q9H6U6 928 aa29.62■■■□□ 2.33
HLA-F-227ENST00000485513 KIF28PB7ZC32 967 aa29.61■■■□□ 2.33
HLA-F-227ENST00000485513 NOP56O00567 594 aaKnown RBP29.61■■■□□ 2.33
HLA-F-227ENST00000485513 MEIS2O14770 477 aa29.61■■■□□ 2.33
HLA-F-227ENST00000485513 FIBPO43427 364 aa29.61■■■□□ 2.33
HLA-F-227ENST00000485513 CXCL10P02778 98 aa29.61■■■□□ 2.33
HLA-F-227ENST00000485513 TRIM71Q2Q1W2 868 aaKnown RBP29.61■■■□□ 2.33
HLA-F-227ENST00000485513 CMTR1Q8N1G2 835 aaKnown RBP29.61■■■□□ 2.33
HLA-F-227ENST00000485513 LRRC2Q9BYS8 371 aa29.61■■■□□ 2.33
HLA-F-227ENST00000485513 PRDM6Q9NQX0 595 aa29.61■■■□□ 2.33
HLA-F-227ENST00000485513 SLC12A7Q9Y666 1083 aa29.61■■■□□ 2.33
HLA-F-227ENST00000485513 H3BRB1 525 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 NBNO60934 754 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 SEMA3FQ13275 785 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 HIC1Q14526 733 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 CCDC85BQ15834 202 aaPredicted RBP29.6■■■□□ 2.33
HLA-F-227ENST00000485513 PCNX4Q63HM2 1172 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 XRRA1Q6P2D8 792 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 CNKSR3Q6P9H4 555 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 METTL7BQ6UX53 244 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 CENPQQ7L2Z9 268 aaPredicted RBP29.6■■■□□ 2.33
HLA-F-227ENST00000485513 CYFIP1Q7L576 1253 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 RAB11FIP4Q86YS3 637 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 WNT8BQ93098 351 aa29.6■■■□□ 2.33
HLA-F-227ENST00000485513 TUT1Q9H6E5 874 aaKnown RBP29.6■■■□□ 2.33
HLA-F-227ENST00000485513 DOCK5Q9H7D0 1870 aa29.59■■■□□ 2.33
HLA-F-227ENST00000485513 LGALS2P05162 132 aa29.59■■■□□ 2.33
HLA-F-227ENST00000485513 WDR5P61964 334 aaKnown RBP29.59■■■□□ 2.33
HLA-F-227ENST00000485513 ZNF618Q5T7W0 954 aa29.59■■■□□ 2.33
HLA-F-227ENST00000485513 SKAP1Q86WV1 359 aa29.59■■■□□ 2.33
HLA-F-227ENST00000485513 SYMPKQ92797 1274 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms