RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 PTH1RQ03431 593 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 PTGISQ16647 500 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 DGKDQ16760 1214 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 GDF6Q6KF10 455 aaPredicted RBP15.36■□□□□ 0.05
UBA3-210ENST00000485424 CATIPQ7Z7H3 387 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 HERC6Q8IVU3 1022 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 DHX37Q8IY37 1157 aaKnown RBP15.36■□□□□ 0.05
UBA3-210ENST00000485424 IL27Q8NEV9 243 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 PHOSPHO2Q8TCD6 241 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 KAT2BQ92831 832 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 KATNAL1Q9BW62 490 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 FTOQ9C0B1 505 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBA3-210ENST00000485424 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 MYO7AQ13402 2215 aa15.36■□□□□ 0.05
UBA3-210ENST00000485424 PALM3A6NDB9 673 aaPredicted RBP15.35■□□□□ 0.05
UBA3-210ENST00000485424 E7EWF7 191 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 BAIAP3O94812 1187 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 COL9A1P20849 921 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 HSD17B4P51659 736 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 TAP1Q03518 808 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 GRM4Q14833 912 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 KRT40Q6A162 431 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 KCNV1Q6PIU1 500 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 SESTD1Q86VW0 696 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 CAGE1Q8TC20 777 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 AFAP1L1Q8TED9 768 aa15.35■□□□□ 0.05
UBA3-210ENST00000485424 DHX38Q92620 1227 aaKnown RBP15.35■□□□□ 0.05
UBA3-210ENST00000485424 NECAB3Q96P71 396 aaPredicted RBP15.35■□□□□ 0.05
UBA3-210ENST00000485424 GCOM1H8Y6P7 765 aaPredicted RBP15.34■□□□□ 0.05
UBA3-210ENST00000485424 GTPBP6O43824 516 aaPredicted RBP15.34■□□□□ 0.05
UBA3-210ENST00000485424 POLR2MP0CAP2 368 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 BMP1P13497 986 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 KCNQ1P51787 676 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 LAMC2Q13753 1193 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 SPRED2Q7Z698 418 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 FCHSD1Q86WN1 690 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 C7orf31Q8N865 590 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
UBA3-210ENST00000485424 ARNTL2Q8WYA1 636 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 PIGSQ96S52 555 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 ALG1Q9BT22 464 aa15.34■□□□□ 0.05
UBA3-210ENST00000485424 TRIOO75962 3097 aa15.33■□□□□ 0.05
UBA3-210ENST00000485424 SGSM2O43147 1006 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 CCND2P30279 289 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.04
UBA3-210ENST00000485424 KCNJ6P48051 423 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 WDR5P61964 334 aaKnown RBP15.33■□□□□ 0.04
UBA3-210ENST00000485424 RBL2Q08999 1139 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 GPNMBQ14956 572 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 SKIV2LQ15477 1246 aaKnown RBP15.33■□□□□ 0.04
UBA3-210ENST00000485424 LRRC8DQ7L1W4 858 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 EMID1Q96A84 441 aaPredicted RBP15.33■□□□□ 0.04
UBA3-210ENST00000485424 MTMR8Q96EF0 704 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 PDCD2LQ9BRP1 358 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 GTF2IRD1Q9UHL9 959 aa15.33■□□□□ 0.04
UBA3-210ENST00000485424 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
UBA3-210ENST00000485424 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 KIF28PB7ZC32 967 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 OPLAHO14841 1288 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 TLL1O43897 1013 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 ZNF286BP0CG31 522 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 SELPP16109 830 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 KIF5BP33176 963 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 PGM5Q15124 567 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 AAK1Q2M2I8 961 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 TMCO2Q7Z6W1 182 aaPredicted RBP15.32■□□□□ 0.04
UBA3-210ENST00000485424 PPTC7Q8NI37 304 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 CUL5Q93034 780 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 RIOX1Q9H6W3 641 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 MLXIPQ9HAP2 919 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 HDAC6Q9UBN7 1215 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 SEC63Q9UGP8 760 aaKnown RBP15.32■□□□□ 0.04
UBA3-210ENST00000485424 RAPGEFL1Q9UHV5 662 aa15.32■□□□□ 0.04
UBA3-210ENST00000485424 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
UBA3-210ENST00000485424 MYH9P35579 1960 aaKnown RBP15.31■□□□□ 0.04
UBA3-210ENST00000485424 EVPLQ92817 2033 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 LCHNA4D1U4 455 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 CCDC69A6NI79 296 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 RBAK-RBAKDNI3L0D1 243 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 SORBS3O60504 671 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 LPXNO60711 386 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
UBA3-210ENST00000485424 NBNO60934 754 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 F2P00734 622 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 CXCL10P02778 98 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 CKBP12277 381 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 PSEN2P49810 448 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 DEFB103AP81534 67 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 GHRHRQ02643 423 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 GRB10Q13322 594 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 MFSD10Q14728 455 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 TCTN1Q2MV58 587 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 GNPTABQ3T906 1256 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 CNKSR3Q6P9H4 555 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 STOX1Q6ZVD7 989 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 SMARCC2Q8TAQ2 1214 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 MAP4K1Q92918 833 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms