RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 GCC1Q96CN9 775 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 TBC1D31Q96DN5 1066 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 XPO4Q9C0E2 1151 aaKnown RBP6.1□□□□□ -1.43
CCDC39-205ENST00000485055 PIH1D3Q9NQM4 214 aaKnown RBP6.1□□□□□ -1.43
CCDC39-205ENST00000485055 ATP8A2Q9NTI2 1148 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 RCAN3Q9UKA8 241 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 TNNQ9UQP3 1299 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 PLXNA1Q9UIW2 1896 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 A0A1W2PPC1 479 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 hCG_1642624A0A1W2PR95 340 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 F8W031 263 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 FZD6O60353 706 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ZNF131P52739 623 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 NKX3-2P78367 333 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 HNRNPUQ00839 825 aaKnown RBP eCLIP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 SEPT6Q14141 434 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 CT47A1Q5JQC4 288 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 TTC39AQ5SRH9 613 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 MAP3K21Q5TCX8 1036 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 NAA16Q6N069 864 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 LHFPL2Q6ZUX7 228 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ZNF354CQ86Y25 554 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ZNF280CQ8ND82 737 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ACRBPQ8NEB7 543 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 SHCBP1Q8NEM2 672 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 MTMR8Q96EF0 704 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 DBNDD2Q9BQY9 259 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 STAP2Q9UGK3 403 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 MYH4Q9Y623 1939 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 COL11A1P12107 1806 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ZNFX1Q9P2E3 1918 aaKnown RBP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 PDHXO00330 501 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 PES1O00541 588 aaKnown RBP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 FRAT2O75474 233 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-205ENST00000485055 HOXC6P09630 235 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 INPP5BP32019 993 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 STT3AP46977 705 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 MAP3K12Q12852 859 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 KIF22Q14807 665 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 JAKMIP3Q5VZ66 844 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ZNF449Q6P9G9 518 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ABRAQ8N0Z2 381 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 SIX5Q8N196 739 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 MAGEB6Q8N7X4 407 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 RASGRP4Q8TDF6 673 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 HVCN1Q96D96 273 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 PRO3102Q9H379 93 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 DNAJC18Q9H819 358 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 EFCC1Q9HA90 598 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 ZSWIM6Q9HCJ5 1215 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 PFDN2Q9UHV9 154 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 LTBP2Q14767 1821 aa6.09□□□□□ -1.43
CCDC39-205ENST00000485055 PLA2G6O60733 806 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 SURF6O75683 361 aaKnown RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 COL9A1P20849 921 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 USP14P54578 494 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 CAP1Q01518 475 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 TAF1CQ15572 869 aaPredicted RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 UVSSAQ2YD98 709 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 ZSCAN25Q6NSZ9 544 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 TTC6Q86TZ1 520 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 TPH2Q8IWU9 490 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 CCDC17Q96LX7 622 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 YIPF4Q9BSR8 244 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 SAP130Q9H0E3 1048 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 SIL1Q9H173 461 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 PAK6Q9NQU5 681 aaPredicted RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 PICK1Q9NRD5 415 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 AASDHPPTQ9NRN7 309 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 GJD2Q9UKL4 321 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 AK5Q9Y6K8 562 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 BAZ2AQ9UIF9 1905 aaKnown RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 A0A087X0B3 334 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 ZFYP08048 801 aaPredicted RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 CLCN6P51797 869 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 FCGRTP55899 365 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 BACE1P56817 501 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 STK3Q13188 491 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 PICALMQ13492 652 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 WDR45BQ5MNZ6 344 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 MORN1Q5T089 497 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 FAM102BQ5T8I3 360 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 KIAA1614Q5VZ46 1190 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 XRRA1Q6P2D8 792 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 ADGRA1Q86SQ6 560 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 TSEN2Q8NCE0 465 aaKnown RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 PNMA1Q8ND90 353 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 SH3RF3Q8TEJ3 882 aaPredicted RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 CHAC2Q8WUX2 184 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 ZKSCAN4Q969J2 545 aaPredicted RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 NOL10Q9BSC4 688 aaKnown RBP6.08□□□□□ -1.44
CCDC39-205ENST00000485055 PLCB1Q9NQ66 1216 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 OBP2AQ9NY56 170 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 ODF2LQ9ULJ1 636 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 PCDHB9Q9Y5E1 797 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 ATP2A1O14983 1001 aa6.08□□□□□ -1.44
CCDC39-205ENST00000485055 CTGFP29279 349 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms