RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
ITGA4-210ENST00000484404 TELO2Q9Y4R8 837 aa15.84■□□□□ 0.13
ITGA4-210ENST00000484404 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
ITGA4-210ENST00000484404 SIP14410 1827 aa15.84■□□□□ 0.13
ITGA4-210ENST00000484404 KLF18A0A0U1RQI7 1052 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 GNAQP50148 359 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 LAMC2Q13753 1193 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 MFSD10Q14728 455 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 KIAA0753Q2KHM9 967 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 CELF3Q5SZQ8 465 aaKnown RBP15.83■□□□□ 0.12
ITGA4-210ENST00000484404 MYSM1Q5VVJ2 828 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 FANCBQ8NB91 859 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 PPTC7Q8NI37 304 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 LZTS2Q9BRK4 669 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 PBX4Q9BYU1 374 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 MLXIPQ9HAP2 919 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 PKD2L1Q9P0L9 805 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 FRMPD4Q14CM0 1322 aa15.83■□□□□ 0.12
ITGA4-210ENST00000484404 LOXHD1Q8IVV2 1947 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 GOLGA8AA7E2F4 631 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 GOLGA8BA8MQT2 603 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 MEIS2O14770 477 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 NEFLP07196 543 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 RABGGTBP53611 331 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 ZNF200P98182 395 aaPredicted RBP15.82■□□□□ 0.12
ITGA4-210ENST00000484404 EXOSC10Q01780 885 aaKnown RBP15.82■□□□□ 0.12
ITGA4-210ENST00000484404 SEMA3FQ13275 785 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 RASIP1Q5U651 963 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 SGMS1Q86VZ5 419 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 SAMD3Q8N6K7 520 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 C7orf31Q8N865 590 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 HERVK_113Q902F9 699 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 DHX38Q92620 1227 aaKnown RBP15.82■□□□□ 0.12
ITGA4-210ENST00000484404 TIFAQ96CG3 184 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 PGBD1Q96JS3 809 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
ITGA4-210ENST00000484404 CTAGE1Q96RT6 745 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 NKX2-4Q9H2Z4 354 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 COL4A4P53420 1690 aaPredicted RBP15.82■□□□□ 0.12
ITGA4-210ENST00000484404 MICAL3Q7RTP6 2002 aa15.82■□□□□ 0.12
ITGA4-210ENST00000484404 ZBTB43O43298 467 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 FGD1P98174 961 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 PTPN11Q06124 597 aaPredicted RBP15.81■□□□□ 0.12
ITGA4-210ENST00000484404 APOBRQ0VD83 1088 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 HIC1Q14526 733 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 GRIN2CQ14957 1233 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 RTN1Q16799 776 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 CHD9Q3L8U1 2897 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 WWC2Q6AWC2 1192 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 CYFIP1Q7L576 1253 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 DHX32Q7L7V1 743 aaKnown RBP15.81■□□□□ 0.12
ITGA4-210ENST00000484404 TRIM50Q86XT4 487 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 RETREG2Q8NC44 543 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 WNT8BQ93098 351 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 EMID1Q96A84 441 aaPredicted RBP15.81■□□□□ 0.12
ITGA4-210ENST00000484404 FTOQ9C0B1 505 aaKnown RBP eCLIP15.81■□□□□ 0.12
ITGA4-210ENST00000484404 PSTPIP2Q9H939 334 aa15.81■□□□□ 0.12
ITGA4-210ENST00000484404 F2P00734 622 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 MYOGP15173 224 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 FOSL2P15408 326 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 SMARCA1P28370 1054 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 GNPTABQ3T906 1256 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 TYW1BQ6NUM6 668 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 RPUSD2Q8IZ73 545 aaKnown RBP15.8■□□□□ 0.12
ITGA4-210ENST00000484404 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
ITGA4-210ENST00000484404 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 MTIF3Q9H2K0 278 aaKnown RBP15.8■□□□□ 0.12
ITGA4-210ENST00000484404 ZNF576Q9H609 170 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 GTF2IRD1Q9UHL9 959 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 YBX2Q9Y2T7 364 aaKnown RBP15.8■□□□□ 0.12
ITGA4-210ENST00000484404 SNX14Q9Y5W7 946 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 WDR81Q562E7 1941 aa15.8■□□□□ 0.12
ITGA4-210ENST00000484404 NOP56O00567 594 aaKnown RBP15.79■□□□□ 0.12
ITGA4-210ENST00000484404 PPFIA3O75145 1194 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 LGALS2P05162 132 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 IQCF3P0C7M6 154 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 CDC27P30260 824 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 NAPAP54920 295 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 BFSP2Q13515 415 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 KRT32Q14532 448 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 UTP14CQ5TAP6 766 aaKnown RBP15.79■□□□□ 0.12
ITGA4-210ENST00000484404 PCNX4Q63HM2 1172 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 Q6ZUG5 572 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 SLC4A7Q9Y6M7 1214 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 UNC80Q8N2C7 3258 aa15.79■□□□□ 0.12
ITGA4-210ENST00000484404 SPATA31C2B4DYI2 1134 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 HAS3O00219 553 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 PIK3CDO00329 1044 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 FIBPO43427 364 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 SESTD1Q86VW0 696 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 CCDC155Q8N6L0 562 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 MAFAQ8NHW3 353 aaPredicted RBP15.78■□□□□ 0.12
ITGA4-210ENST00000484404 BRF1Q92994 677 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 C16orf70Q9BSU1 422 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 PRDM12Q9H4Q4 367 aa15.78■□□□□ 0.12
ITGA4-210ENST00000484404 RBM28Q9NW13 759 aaKnown RBP15.78■□□□□ 0.12
ITGA4-210ENST00000484404 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms