RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 DLL1O00548 723 aa22.9■■□□□ 1.26
HPS4-213ENST00000483631 GGPS1O95749 300 aa22.9■■□□□ 1.26
HPS4-213ENST00000483631 UBA1P22314 1058 aaKnown RBP22.9■■□□□ 1.26
HPS4-213ENST00000483631 PSEN2P49810 448 aa22.9■■□□□ 1.26
HPS4-213ENST00000483631 GRIN2CQ14957 1233 aa22.9■■□□□ 1.26
HPS4-213ENST00000483631 TSGA10IPQ3SY00 556 aa22.9■■□□□ 1.26
HPS4-213ENST00000483631 PBX2P40425 430 aa22.89■■□□□ 1.25
HPS4-213ENST00000483631 MFSD10Q14728 455 aa22.89■■□□□ 1.25
HPS4-213ENST00000483631 GDF6Q6KF10 455 aaPredicted RBP22.89■■□□□ 1.25
HPS4-213ENST00000483631 TEX2Q8IWB9 1127 aa22.89■■□□□ 1.25
HPS4-213ENST00000483631 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.89■■□□□ 1.25
HPS4-213ENST00000483631 SRBD1Q8N5C6 995 aaKnown RBP22.89■■□□□ 1.25
HPS4-213ENST00000483631 C7orf31Q8N865 590 aa22.89■■□□□ 1.25
HPS4-213ENST00000483631 SPATA33Q96N06 139 aa22.89■■□□□ 1.25
HPS4-213ENST00000483631 CTAGE1Q96RT6 745 aa22.89■■□□□ 1.25
HPS4-213ENST00000483631 MRPS9P82933 396 aaKnown RBP22.88■■□□□ 1.25
HPS4-213ENST00000483631 SP2Q02086 613 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 NEDD9Q14511 834 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 KIAA0753Q2KHM9 967 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 HSDL1Q3SXM5 330 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 PCNX4Q63HM2 1172 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 FANCBQ8NB91 859 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 SMARCC2Q8TAQ2 1214 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 PHOSPHO2Q8TCD6 241 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 HDAC6Q9UBN7 1215 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 PCDHA11Q9Y5I1 949 aa22.88■■□□□ 1.25
HPS4-213ENST00000483631 A0A0C4DFX4 3053 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 SPATA31C2B4DYI2 1134 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 MEIS2O14770 477 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 FIBPO43427 364 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 CDC45O75419 566 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 BAIAP3O94812 1187 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 PLEKHA8P1O95397 391 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 DEFB128Q7Z7B8 93 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 PIBF1Q8WXW3 757 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 NEK1Q96PY6 1258 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 SLC9A7Q96T83 725 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 MLXIPQ9HAP2 919 aa22.87■■□□□ 1.25
HPS4-213ENST00000483631 ZBBXA8MT70 800 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 ZNF286BP0CG31 522 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 SELPP16109 830 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 ATP2A2P16615 1042 aaKnown RBP22.86■■□□□ 1.25
HPS4-213ENST00000483631 CHMP4BP1P59074 171 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 PTK7Q13308 1070 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 COL9A3Q14050 684 aaPredicted RBP22.86■■□□□ 1.25
HPS4-213ENST00000483631 KRT32Q14532 448 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 METTL7BQ6UX53 244 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 SYNE3Q6ZMZ3 975 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 TMTC3Q6ZXV5 915 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 PPP1R13LQ8WUF5 828 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 GAS2L1Q99501 681 aaPredicted RBP22.86■■□□□ 1.25
HPS4-213ENST00000483631 SENP7Q9BQF6 1050 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 C16orf70Q9BSU1 422 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 SLC28A3Q9HAS3 691 aa22.86■■□□□ 1.25
HPS4-213ENST00000483631 USP17L6PQ6QN14 398 aa22.85■■□□□ 1.25
HPS4-213ENST00000483631 DHX32Q7L7V1 743 aaKnown RBP22.85■■□□□ 1.25
HPS4-213ENST00000483631 ALG1Q9BT22 464 aa22.85■■□□□ 1.25
HPS4-213ENST00000483631 USP26Q9BXU7 913 aa22.85■■□□□ 1.25
HPS4-213ENST00000483631 PSTPIP2Q9H939 334 aa22.85■■□□□ 1.25
HPS4-213ENST00000483631 RBM28Q9NW13 759 aaKnown RBP22.85■■□□□ 1.25
HPS4-213ENST00000483631 RCAN1P53805 252 aa22.84■■□□□ 1.25
HPS4-213ENST00000483631 EXOSC10Q01780 885 aaKnown RBP22.84■■□□□ 1.25
HPS4-213ENST00000483631 LRRC8DQ7L1W4 858 aa22.84■■□□□ 1.25
HPS4-213ENST00000483631 NLRX1Q86UT6 975 aa22.84■■□□□ 1.25
HPS4-213ENST00000483631 GIMAP8Q8ND71 665 aaPredicted RBP22.84■■□□□ 1.25
HPS4-213ENST00000483631 DHX38Q92620 1227 aaKnown RBP22.84■■□□□ 1.25
HPS4-213ENST00000483631 GPKOWQ92917 476 aaPredicted RBP eCLIP22.84■■□□□ 1.25
HPS4-213ENST00000483631 CDHR1Q96JP9 859 aa22.84■■□□□ 1.25
HPS4-213ENST00000483631 YBX2Q9Y2T7 364 aaKnown RBP22.84■■□□□ 1.25
HPS4-213ENST00000483631 NOP56O00567 594 aaKnown RBP22.83■■□□□ 1.25
HPS4-213ENST00000483631 CXCL10P02778 98 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 HMGB1P09429 215 aaKnown RBP22.83■■□□□ 1.25
HPS4-213ENST00000483631 CKBP12277 381 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 RXRAP19793 462 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 HOXC8P31273 242 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 SEMA3FQ13275 785 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 APOA5Q6Q788 366 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 MICU3Q86XE3 530 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 LRRC2Q9BYS8 371 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 FTOQ9C0B1 505 aaKnown RBP eCLIP22.83■■□□□ 1.25
HPS4-213ENST00000483631 NKX2-4Q9H2Z4 354 aa22.83■■□□□ 1.25
HPS4-213ENST00000483631 DOCK5Q9H7D0 1870 aa22.83■■□□□ 1.24
HPS4-213ENST00000483631 KAT6AQ92794 2004 aa22.82■■□□□ 1.24
HPS4-213ENST00000483631 UNC80Q8N2C7 3258 aa22.82■■□□□ 1.24
HPS4-213ENST00000483631 CHD9Q3L8U1 2897 aa22.82■■□□□ 1.24
HPS4-213ENST00000483631 H3BRB1 525 aa22.82■■□□□ 1.24
HPS4-213ENST00000483631 LGALS2P05162 132 aa22.82■■□□□ 1.24
HPS4-213ENST00000483631 GPRASP2Q96D09 838 aa22.82■■□□□ 1.24
HPS4-213ENST00000483631 TUT1Q9H6E5 874 aaKnown RBP22.82■■□□□ 1.24
HPS4-213ENST00000483631 hCG_1984214I3L0E3 225 aa22.81■■□□□ 1.24
HPS4-213ENST00000483631 EFCAB14O75071 495 aa22.81■■□□□ 1.24
HPS4-213ENST00000483631 TRIM71Q2Q1W2 868 aaKnown RBP22.81■■□□□ 1.24
HPS4-213ENST00000483631 CNKSR3Q6P9H4 555 aa22.81■■□□□ 1.24
HPS4-213ENST00000483631 SERINC5Q86VE9 423 aa22.81■■□□□ 1.24
HPS4-213ENST00000483631 CMTR1Q8N1G2 835 aaKnown RBP22.81■■□□□ 1.24
HPS4-213ENST00000483631 ZNF713Q8N859 430 aaPredicted RBP22.81■■□□□ 1.24
HPS4-213ENST00000483631 ZFP91Q96JP5 570 aaPredicted RBP22.81■■□□□ 1.24
HPS4-213ENST00000483631 GPR20Q99678 358 aa22.81■■□□□ 1.24
HPS4-213ENST00000483631 RTEL1Q9NZ71 1219 aa22.81■■□□□ 1.24
HPS4-213ENST00000483631 MAFGO15525 162 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms