RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 KLF18A0A0U1RQI7 1052 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 HAS3O00219 553 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 F2P00734 622 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 CALM1P0DP23 149 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 CALM2P0DP24 149 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 CALM3P0DP25 149 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 CCND2P30279 289 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 ADD1P35611 737 aaKnown RBP13.93□□□□□ -0.18
HDLBP-239ENST00000483086 PBX2P40425 430 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 ZNF200P98182 395 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-239ENST00000483086 PPIGQ13427 754 aaKnown RBP eCLIP13.93□□□□□ -0.182e-13■□□□□ 9.1
HDLBP-239ENST00000483086 FAM47CQ5HY64 1035 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 NFRKBQ6P4R8 1299 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 Q6ZUG5 572 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 DHX37Q8IY37 1157 aaKnown RBP13.93□□□□□ -0.18
HDLBP-239ENST00000483086 PPTC7Q8NI37 304 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 JAKMIP1Q96N16 626 aaKnown RBP13.93□□□□□ -0.18
HDLBP-239ENST00000483086 LZTS2Q9BRK4 669 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 IL23AQ9NPF7 189 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
HDLBP-239ENST00000483086 ZBTB43O43298 467 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 ATP9AO75110 1047 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 ICAM3P32942 547 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 GNAQP50148 359 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 SMAD3P84022 425 aaKnown RBP13.92□□□□□ -0.18
HDLBP-239ENST00000483086 RTN1Q16799 776 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 TCTN1Q2MV58 587 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 C16orf70Q9BSU1 422 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 AGXT2Q9BYV1 514 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 HDAC6Q9UBN7 1215 aa13.92□□□□□ -0.18
HDLBP-239ENST00000483086 SEC63Q9UGP8 760 aaKnown RBP13.92□□□□□ -0.18
HDLBP-239ENST00000483086 GOLGA8AA7E2F4 631 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 GOLGA8BA8MQT2 603 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 SPATA31C2B4DYI2 1134 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 STXBP3O00186 592 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 KPNA6O60684 536 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 PPFIA3O75145 1194 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 ITGB5P18084 799 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 PSEN2P49810 448 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 LAMC2Q13753 1193 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 KRT32Q14532 448 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 DGKDQ16760 1214 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 PCNX4Q63HM2 1172 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 HEATR3Q7Z4Q2 680 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 BRF1Q92994 677 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 SPATA33Q96N06 139 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 SEMA6BQ9H3T3 888 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 PSTPIP2Q9H939 334 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 V9GY48 417 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-239ENST00000483086 NID2Q14112 1375 aa13.91□□□□□ -0.18
HDLBP-239ENST00000483086 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 CASTP20810 708 aaKnown RBP13.9□□□□□ -0.18
HDLBP-239ENST00000483086 RPS6KB1P23443 525 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 TRAF1Q13077 416 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 MFSD10Q14728 455 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 PKN1Q16512 942 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 PTGISQ16647 500 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 KIAA0753Q2KHM9 967 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 TRIM71Q2Q1W2 868 aaKnown RBP13.9□□□□□ -0.18
HDLBP-239ENST00000483086 BRDTQ58F21 947 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-239ENST00000483086 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 OTOP2Q7RTS6 562 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 TRIM50Q86XT4 487 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 CYP2W1Q8TAV3 490 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 HERVK_113Q902F9 699 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 SEZ6LQ9BYH1 1024 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 PBX4Q9BYU1 374 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 OSBPL7Q9BZF2 842 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 TMEM260Q9NX78 707 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 GTF2IRD1Q9UHL9 959 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 MICAL3Q7RTP6 2002 aa13.9□□□□□ -0.18
HDLBP-239ENST00000483086 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 TGFB3P10600 412 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 KCNA2P16389 499 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 DNAJB2P25686 324 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 PTPN11Q06124 597 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-239ENST00000483086 TOB2Q14106 344 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-239ENST00000483086 NTRK3Q16288 839 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 DEFB128Q7Z7B8 93 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 FBXL16Q8N461 479 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-239ENST00000483086 GPR20Q99678 358 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
HDLBP-239ENST00000483086 RBM28Q9NW13 759 aaKnown RBP13.89□□□□□ -0.19
HDLBP-239ENST00000483086 PPP4R2Q9NY27 417 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 UBIAD1Q9Y5Z9 338 aa13.89□□□□□ -0.19
HDLBP-239ENST00000483086 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-239ENST00000483086 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-239ENST00000483086 FIBPO43427 364 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms