RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 ADGRF4Q8IZF3 695 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 SH3GL2Q99962 352 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 SEMA6BQ9H3T3 888 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 FAM207AQ9NSI2 230 aaPredicted RBP16.87■□□□□ 0.29
DDR1-244ENST00000482873 SBF2Q86WG5 1849 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 ZNF263O14978 683 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 SLC7A5Q01650 507 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 GRB10Q13322 594 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 ECM1Q16610 540 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 MSL1Q68DK7 614 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 ZC3H12CQ9C0D7 883 aaKnown RBP16.87■□□□□ 0.29
DDR1-244ENST00000482873 SAMM50Q9Y512 469 aa16.87■□□□□ 0.29
DDR1-244ENST00000482873 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
DDR1-244ENST00000482873 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
DDR1-244ENST00000482873 SRGNP10124 158 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 DNM2P50570 870 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 KCNB1Q14721 858 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 MCTP2Q6DN12 878 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 GALNT17Q6IS24 598 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 USP17L6PQ6QN14 398 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 BANK1Q8NDB2 785 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 SNX29Q8TEQ0 813 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 BLOC1S4Q9NUP1 217 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 CAPN6Q9Y6Q1 641 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 MYH10P35580 1976 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 EPHB6O15197 1021 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 BBOX1O75936 387 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 MATR3P43243 847 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-244ENST00000482873 ADCY7P51828 1080 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 RBM5P52756 815 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-244ENST00000482873 MMGT1Q8N4V1 131 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 TSEN2Q8NCE0 465 aaKnown RBP16.86■□□□□ 0.29
DDR1-244ENST00000482873 ARL8AQ96BM9 186 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 PNMA5Q96PV4 448 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 JMJD4Q9H9V9 463 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 SNX12Q9UMY4 172 aa16.86■□□□□ 0.29
DDR1-244ENST00000482873 POLRMTO00411 1230 aaKnown RBP16.85■□□□□ 0.29
DDR1-244ENST00000482873 PLCG2P16885 1265 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 KIF5AQ12840 1032 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 KCNV1Q6PIU1 500 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 THAP9Q9H5L6 903 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 SMARCAL1Q9NZC9 954 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 DDX60LQ5H9U9 1706 aaKnown RBP16.85■□□□□ 0.29
DDR1-244ENST00000482873 RGL2O15211 777 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 CCNE1P24864 410 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 HNRNPH1P31943 449 aaKnown RBP16.85■□□□□ 0.29
DDR1-244ENST00000482873 TTMPQ5BVD1 217 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 SWT1Q5T5J6 900 aaKnown RBP16.85■□□□□ 0.29
DDR1-244ENST00000482873 IQCEQ6IPM2 695 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 SV2BQ7L1I2 683 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 CCDC170Q8IYT3 715 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 SPATA4Q8NEY3 305 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 RIOX1Q9H6W3 641 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 ZNHIT6Q9NWK9 470 aaKnown RBP16.85■□□□□ 0.29
DDR1-244ENST00000482873 SERPINB13Q9UIV8 391 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
DDR1-244ENST00000482873 SHTN1A0MZ66 631 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 PRPHP41219 470 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 VAV2P52735 878 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 FKBP15Q5T1M5 1219 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 CCDC70Q6NSX1 233 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 GBP6Q6ZN66 633 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 PSMB7Q99436 277 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 EHD2Q9NZN4 543 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 NPHP3-ACAD11A0A0J9YXS1 232 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 GOLGA8KD6RF30 607 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 LAD1O00515 517 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 CXCR5P32302 372 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 ZBED6P86452 979 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 ZSCAN29Q8IWY8 852 aaPredicted RBP16.84■□□□□ 0.29
DDR1-244ENST00000482873 CEP120Q8N960 986 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 ZHX3Q9H4I2 956 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 MMRN2Q9H8L6 949 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
DDR1-244ENST00000482873 CEP83Q9Y592 693 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 GAKO14976 1311 aa16.84■□□□□ 0.29
DDR1-244ENST00000482873 APBA1Q02410 837 aa16.83■□□□□ 0.29
DDR1-244ENST00000482873 MIIPQ5JXC2 388 aa16.83■□□□□ 0.29
DDR1-244ENST00000482873 LARP4BQ92615 738 aaKnown RBP16.83■□□□□ 0.29
DDR1-244ENST00000482873 CEP89Q96ST8 783 aa16.83■□□□□ 0.29
DDR1-244ENST00000482873 FGFBP2Q9BYJ0 223 aa16.83■□□□□ 0.29
DDR1-244ENST00000482873 MLXIPQ9HAP2 919 aa16.83■□□□□ 0.29
DDR1-244ENST00000482873 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.29
DDR1-244ENST00000482873 INPP5BP32019 993 aa16.83■□□□□ 0.28
DDR1-244ENST00000482873 SHMT1P34896 483 aa16.83■□□□□ 0.28
DDR1-244ENST00000482873 PDCLQ13371 301 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms