RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 DBHP09172 617 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.111e-17■■■■□ 19.4
SF3B1-210ENST00000482158 SDHBP21912 280 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 SOX5P35711 763 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 ERVFRD-1P60508 538 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
SF3B1-210ENST00000482158 FAM47CQ5HY64 1035 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 WWC2Q6AWC2 1192 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 ATG4DQ86TL0 474 aaPredicted RBP8.1□□□□□ -1.11
SF3B1-210ENST00000482158 OSTM1Q86WC4 334 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 PIP4K2CQ8TBX8 421 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 KIRREL1Q96J84 757 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 SMURF1Q9HCE7 757 aa8.1□□□□□ -1.11
SF3B1-210ENST00000482158 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
SF3B1-210ENST00000482158 SRGAP3O43295 1099 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 EYA4O95677 639 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 PDE6AP16499 860 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 JAM2P57087 298 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 RBM10P98175 930 aaKnown RBP8.09□□□□□ -1.11
SF3B1-210ENST00000482158 EMC4Q5J8M3 183 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 RPUSD2Q8IZ73 545 aaKnown RBP8.09□□□□□ -1.11
SF3B1-210ENST00000482158 CISD2Q8N5K1 135 aaKnown RBP8.09□□□□□ -1.11
SF3B1-210ENST00000482158 ZCRB1Q8TBF4 217 aaKnown RBP8.09□□□□□ -1.11
SF3B1-210ENST00000482158 RXFP1Q9HBX9 757 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 SLC6A20Q9NP91 592 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 CATSPERZQ9NTU4 200 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.11
SF3B1-210ENST00000482158 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
SF3B1-210ENST00000482158 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 ZNF891A8MT65 544 aaPredicted RBP8.08□□□□□ -1.12
SF3B1-210ENST00000482158 TADA3O75528 432 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 DGKIO75912 1065 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 GNAT1P11488 350 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 CNGA1P29973 690 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 SLC6A11P48066 632 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 ST5P78524 1137 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 KIF18BQ86Y91 864 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 NETO2Q8NC67 525 aa8.08□□□□□ -1.12
SF3B1-210ENST00000482158 A0A1W2PQJ5 194 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 GSTA4O15217 222 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 SGSM2O43147 1006 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 F2P00734 622 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 APPP05067 770 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 ARL4AP40617 200 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 DSG1Q02413 1049 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 SPIRE1Q08AE8 756 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 DHCR24Q15392 516 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 GPR19Q15760 415 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 CRY1Q16526 586 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 CREB3L3Q68CJ9 461 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 FSTL4Q6MZW2 842 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 ARHGAP36Q6ZRI8 547 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 DDX46Q7L014 1031 aaKnown RBP8.07□□□□□ -1.12
SF3B1-210ENST00000482158 OTOP1Q7RTM1 612 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 NXPE1Q8N323 547 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 CHST14Q8NCH0 376 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 UHMK1Q8TAS1 419 aaKnown RBP8.07□□□□□ -1.12
SF3B1-210ENST00000482158 INTS4Q96HW7 963 aaKnown RBP8.07□□□□□ -1.12
SF3B1-210ENST00000482158 B4GALT6Q9UBX8 382 aa8.07□□□□□ -1.12
SF3B1-210ENST00000482158 ZC3H12DA2A288 527 aaKnown RBP8.06□□□□□ -1.12
SF3B1-210ENST00000482158 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.06□□□□□ -1.12
SF3B1-210ENST00000482158 MAN2B1O00754 1011 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 PAPLNO95428 1278 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 CYBBP04839 570 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 ITGB5P18084 799 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 NFKB2Q00653 900 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 PAQR3Q6TCH7 311 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 DDX42Q86XP3 938 aaKnown RBP eCLIP8.06□□□□□ -1.12
SF3B1-210ENST00000482158 RBM12BQ8IXT5 1001 aaKnown RBP8.06□□□□□ -1.12
SF3B1-210ENST00000482158 Q8N3U1 123 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 ATP8A1Q9Y2Q0 1164 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 TELO2Q9Y4R8 837 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 HCFC2Q9Y5Z7 792 aa8.06□□□□□ -1.12
SF3B1-210ENST00000482158 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 KCNK3O14649 394 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 ZBTB48P10074 688 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-210ENST00000482158 BPIP17213 487 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 KRT15P19012 456 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 CDKN1CP49918 316 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-210ENST00000482158 STRN3Q13033 797 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 CT47A1Q5JQC4 288 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-210ENST00000482158 STEAP3Q658P3 488 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 HHIPL2Q6UWX4 724 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 RPTNQ6XPR3 784 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 LHFPL2Q6ZUX7 228 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 CABP7Q86V35 215 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 PTRH1Q86Y79 214 aaKnown RBP8.05□□□□□ -1.12
SF3B1-210ENST00000482158 KLHL14Q9P2G3 628 aa8.05□□□□□ -1.12
SF3B1-210ENST00000482158 PTPDC1A2A3K4 754 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 NUDT19A8MXV4 375 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 HGSO14964 777 aaPredicted RBP8.04□□□□□ -1.12
SF3B1-210ENST00000482158 SLC27A2O14975 620 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 GLI1P08151 1106 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 ATP2A2P16615 1042 aaKnown RBP8.04□□□□□ -1.12
SF3B1-210ENST00000482158 IBSPP21815 317 aaPredicted RBP8.04□□□□□ -1.12
SF3B1-210ENST00000482158 ADGRF1Q5T601 910 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 ZSWIM9Q86XI8 627 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 DCP2Q8IU60 420 aaKnown RBP8.04□□□□□ -1.12
SF3B1-210ENST00000482158 KRTAP1-3Q8IUG1 177 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 NOSTRINQ8IVI9 506 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms