RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 SLC39A14Q15043 492 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 PTPAQ15257 358 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 ARMCX2Q7L311 632 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 FBXO16Q8IX29 292 aaPredicted RBP7.28□□□□□ -1.24
HERC4-210ENST00000480158 SAMD3Q8N6K7 520 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 DNERQ8NFT8 737 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 MAML3Q96JK9 1138 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 MXRA8Q9BRK3 442 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 SCAND2PQ9GZW5 306 aaPredicted RBP7.28□□□□□ -1.24
HERC4-210ENST00000480158 BCAS3Q9H6U6 928 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 POLR3EQ9NVU0 708 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 FLRT1Q9NZU1 646 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 GJD2Q9UKL4 321 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 FARP1Q9Y4F1 1045 aaPredicted RBP7.28□□□□□ -1.24
HERC4-210ENST00000480158 ZSWIM8A7E2V4 1837 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 IGLV3-22A0A075B6J6 115 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 MSH4O15457 936 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 CHMP2AO43633 222 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 FKTNO75072 461 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 ATP9AO75110 1047 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 RGS20O76081 388 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 CYP3A4P08684 503 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 ZRSR1Q15695 479 aaKnown RBP7.27□□□□□ -1.25
HERC4-210ENST00000480158 IL17AQ16552 155 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 TMEM63BQ5T3F8 832 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 PPP4R3AQ6IN85 833 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 ABRAQ8N0Z2 381 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 LENG9Q96B70 501 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 ZNF577Q9BSK1 485 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 PANK2Q9BZ23 570 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 PDGFCQ9NRA1 345 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 KCNH7Q9NS40 1196 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 PCDHA7Q9UN72 937 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 GOLGA6L4A6NEF3 574 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 PP2D1A8MPX8 630 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 MEIS1O00470 390 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 EIF3JO75822 258 aaKnown RBP7.27□□□□□ -1.25
HERC4-210ENST00000480158 MYCP01106 439 aaPredicted RBP7.27□□□□□ -1.25
HERC4-210ENST00000480158 OR52Z1P0C646 297 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 ELNP15502 786 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 RGS2P41220 211 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 NASPP49321 788 aaPredicted RBP7.27□□□□□ -1.25
HERC4-210ENST00000480158 C4orf32Q8N8J7 132 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 HAS1Q92839 578 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 IWS1Q96ST2 819 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 TINF2Q9BSI4 451 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 CFHR5Q9BXR6 569 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 TTC12Q9H892 705 aaPredicted RBP7.27□□□□□ -1.25
HERC4-210ENST00000480158 SAGE1Q9NXZ1 904 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 SLC5A4Q9NY91 659 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 RCOR1Q9UKL0 485 aa7.27□□□□□ -1.25
HERC4-210ENST00000480158 ZHX1Q9UKY1 873 aaPredicted RBP7.27□□□□□ -1.25
HERC4-210ENST00000480158 CYP3A7-CYP3A51PA0A087WV96 503 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 ASB14A6NK59 587 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 IPO5O00410 1097 aaKnown RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 YEATS4O95619 227 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 SNAI1O95863 264 aaPredicted RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 GCFC2P16383 781 aaKnown RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 CYP3A7P24462 503 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 CIITAP33076 1130 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 ATP2C1P98194 919 aaPredicted RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 SP2Q02086 613 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 TRIM32Q13049 653 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 LY6KQ17RY6 165 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 GJC2Q5T442 439 aaPredicted RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 ATL3Q6DD88 541 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 DTHD1Q6ZMT9 781 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 TRMT1LQ7Z2T5 733 aaKnown RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 KCNG4Q8TDN1 519 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 SOCS4Q8WXH5 440 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 MPHOSPH6Q99547 160 aaKnown RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 ARID3AQ99856 593 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 CSRNP2Q9H175 543 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 JADE2Q9NQC1 790 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 FBXO2Q9UK22 296 aaPredicted RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 PCDHA12Q9UN75 941 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 TRIM17Q9Y577 477 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 UBIAD1Q9Y5Z9 338 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 FRMPD4Q14CM0 1322 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 PLXNB2O15031 1838 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 MYH7BA7E2Y1 1941 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 POTEMA6NI47 508 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 B4DLN1 442 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 GOLGA6L22H0YM25 854 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 EDNRBP24530 442 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 MCM4P33991 863 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 ITGB3BPQ13352 177 aaPredicted RBP7.26□□□□□ -1.25
HERC4-210ENST00000480158 GNPTABQ3T906 1256 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 Q4G0T1 1027 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 LRCH2Q5VUJ6 765 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 USP49Q70CQ1 688 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 ETNPPLQ8TBG4 499 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 RAET1EQ8TD07 263 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 TRIB2Q92519 343 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 USP6NLQ92738 828 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 ERO1AQ96HE7 468 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 EPSTI1Q96J88 318 aa7.26□□□□□ -1.25
HERC4-210ENST00000480158 MTMR9Q96QG7 549 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms