RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PTPN11Q06124 597 aaPredicted RBP12.13□□□□□ -0.47
SMURF1-204ENST00000480055 BFSP2Q13515 415 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 VPS53Q5VIR6 699 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 ADGRD1Q6QNK2 874 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 LMCD1Q9NZU5 365 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 PNMA2Q9UL42 364 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
SMURF1-204ENST00000480055 LCHNA4D1U4 455 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 NKRFO15226 690 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMURF1-204ENST00000480055 ORC4O43929 436 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
SMURF1-204ENST00000480055 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
SMURF1-204ENST00000480055 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 BTNL9Q6UXG8 535 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 GDPD5Q8WTR4 605 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 SCFD2Q8WU76 684 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 COPS5Q92905 334 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 EVI5LQ96CN4 794 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 HELLSQ9NRZ9 838 aa12.12□□□□□ -0.47
SMURF1-204ENST00000480055 A6NJR5 290 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 FOXP2O15409 715 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 KCNJ6P48051 423 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 HAND2P61296 217 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 RPS6P62753 249 aaKnown RBP12.11□□□□□ -0.47
SMURF1-204ENST00000480055 USH1GQ495M9 461 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 CAGE1Q8TC20 777 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 KIAA1468Q9P260 1216 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
SMURF1-204ENST00000480055 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 PRR33A8MZF0 331 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 FGAP02671 866 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 PDHBP11177 359 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 EDNRBP24530 442 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 NOVP48745 357 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 ALX1Q15699 326 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 PTGISQ16647 500 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 MCMDC2Q4G0Z9 681 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 MFSD6Q6ZSS7 791 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 SEPT14Q6ZU15 432 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 CHST3Q7LGC8 479 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
SMURF1-204ENST00000480055 DNERQ8NFT8 737 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
SMURF1-204ENST00000480055 TCP11L1Q9NUJ3 509 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
SMURF1-204ENST00000480055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.09□□□□□ -0.47
SMURF1-204ENST00000480055 GPR37O15354 613 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 FGRP09769 529 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 GOLGA8HP0CJ92 632 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 DEFB103AP81534 67 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 RBL2Q08999 1139 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 GPNMBQ14956 572 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 LEXMQ3ZCV2 418 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 TMCO2Q7Z6W1 182 aaPredicted RBP12.09□□□□□ -0.47
SMURF1-204ENST00000480055 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 FAM227BQ96M60 508 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
SMURF1-204ENST00000480055 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
SMURF1-204ENST00000480055 DOCK5Q9H7D0 1870 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 DHX16O60231 1041 aaKnown RBP12.08□□□□□ -0.48
SMURF1-204ENST00000480055 GJB5O95377 273 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 PARNO95453 639 aaKnown RBP12.08□□□□□ -0.48
SMURF1-204ENST00000480055 CXCL10P02778 98 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
SMURF1-204ENST00000480055 SELPP16109 830 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 ERVK-21P61565 698 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 LY6KQ17RY6 165 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 LRRC8DQ7L1W4 858 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 ALYREFQ86V81 257 aaKnown RBP12.08□□□□□ -0.48
SMURF1-204ENST00000480055 AFG1LQ8WV93 481 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 DHX38Q92620 1227 aaKnown RBP12.08□□□□□ -0.48
SMURF1-204ENST00000480055 TTC14Q96N46 770 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 TGS1Q96RS0 853 aaKnown RBP12.08□□□□□ -0.48
SMURF1-204ENST00000480055 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 UBA5Q9GZZ9 404 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 SUGCTQ9HAC7 445 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 KIAA1671Q9BY89 1806 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 WDR19Q8NEZ3 1342 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 KAT6AQ92794 2004 aa12.08□□□□□ -0.48
SMURF1-204ENST00000480055 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 LINC01553A4QN01 128 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 ARIH2O95376 493 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 GH1P01241 217 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 CASTP20810 708 aaKnown RBP12.07□□□□□ -0.48
SMURF1-204ENST00000480055 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
SMURF1-204ENST00000480055 STXBP2Q15833 593 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 TCTN1Q2MV58 587 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 GPATCH4Q5T3I0 446 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms