RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 MCM5P33992 734 aa20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 SP4Q02446 784 aa20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 KIAA0753Q2KHM9 967 aa20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 TCTN1Q2MV58 587 aa20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 CELF3Q5SZQ8 465 aaKnown RBP20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 MYSM1Q5VVJ2 828 aa20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 CERS4Q9HA82 394 aa20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 MSRAQ9UJ68 235 aa20.09■□□□□ 0.81
ECHDC1-216ENST00000479525 TMEM265A0A087WTH1 108 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 DDAH1O94760 285 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 SEMA3FQ13275 785 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 LAMC2Q13753 1193 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 CCDC85BQ15834 202 aaPredicted RBP20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 UBE2SQ16763 222 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 MICU3Q86XE3 530 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 RETREG2Q8NC44 543 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 PPTC7Q8NI37 304 aa20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 RRP36Q96EU6 259 aaKnown RBP20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 COL25A1Q9BXS0 654 aaPredicted RBP20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 MTIF3Q9H2K0 278 aaKnown RBP20.08■□□□□ 0.81
ECHDC1-216ENST00000479525 ARHGEF15O94989 841 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 ATP2A2P16615 1042 aaKnown RBP20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 ADGRE1Q14246 886 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 GPNMBQ14956 572 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 C7orf31Q8N865 590 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 SMARCC2Q8TAQ2 1214 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 SPZ1Q9BXG8 430 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 MLXIPQ9HAP2 919 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 GTF2IRD1Q9UHL9 959 aa20.08■□□□□ 0.8
ECHDC1-216ENST00000479525 KAT6AQ92794 2004 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 RFXAPO00287 272 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 IGFBP4P22692 258 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 PTPN11Q06124 597 aaPredicted RBP20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 ADCK5Q3MIX3 580 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 CENPQQ7L2Z9 268 aaPredicted RBP20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 CYFIP1Q7L576 1253 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 SPRED2Q7Z698 418 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 RASEFQ8IZ41 740 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 EMID1Q96A84 441 aaPredicted RBP20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 MAF1Q9H063 256 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 PKD2L1Q9P0L9 805 aa20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
ECHDC1-216ENST00000479525 COL4A4P53420 1690 aaPredicted RBP20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 MEIS2O14770 477 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 F2P00734 622 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 CPA1P15085 419 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 KIF5BP33176 963 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 BFSP2Q13515 415 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 RAB30Q15771 203 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 BMP2KLQ5H9B9 411 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 PPP2R2DQ66LE6 453 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 TRIM50Q86XT4 487 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 MICALL1Q8N3F8 863 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 TMEM87BQ96K49 555 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 SLC28A3Q9HAS3 691 aa20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 MAP3K20Q9NYL2 800 aaKnown RBP20.06■□□□□ 0.8
ECHDC1-216ENST00000479525 HAS3O00219 553 aa20.05■□□□□ 0.8
ECHDC1-216ENST00000479525 PITPNM1O00562 1244 aa20.05■□□□□ 0.8
ECHDC1-216ENST00000479525 CKBP12277 381 aa20.05■□□□□ 0.8
ECHDC1-216ENST00000479525 LRRC8DQ7L1W4 858 aa20.05■□□□□ 0.8
ECHDC1-216ENST00000479525 PGBD1Q96JS3 809 aa20.05■□□□□ 0.8
ECHDC1-216ENST00000479525 GAS2L1Q99501 681 aaPredicted RBP20.05■□□□□ 0.8
ECHDC1-216ENST00000479525 SLC12A7Q9Y666 1083 aa20.05■□□□□ 0.8
ECHDC1-216ENST00000479525 FRMPD4Q14CM0 1322 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 NBNO60934 754 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 CA3P07451 260 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 ZNF618Q5T7W0 954 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 UTP14CQ5TAP6 766 aaKnown RBP20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 SESTD1Q86VW0 696 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 CUL5Q93034 780 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 C16orf70Q9BSU1 422 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 MICAL3Q7RTP6 2002 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 SIP14410 1827 aa20.04■□□□□ 0.8
ECHDC1-216ENST00000479525 LGALS2P05162 132 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 ACTN1P12814 892 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 DEFB103AP81534 67 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 TMTC3Q6ZXV5 915 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 HEATR3Q7Z4Q2 680 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 NEK1Q96PY6 1258 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 MAP3K14Q99558 947 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 KATNAL1Q9BW62 490 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 OSBPL7Q9BZF2 842 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 BRPF3Q9ULD4 1205 aa20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 NAP1L2Q9ULW6 460 aaPredicted RBP20.03■□□□□ 0.8
ECHDC1-216ENST00000479525 CNTNAP5Q8WYK1 1306 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 EPOPA6NHQ4 379 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 HOXD8P13378 290 aaPredicted RBP20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 SELPP16109 830 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 LIFRP42702 1097 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 TRAF1Q13077 416 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 MBTPS1Q14703 1052 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 TRIM71Q2Q1W2 868 aaKnown RBP20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 KRT40Q6A162 431 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 FAM117BQ6P1L5 589 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 KCNV1Q6PIU1 500 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 SAMD3Q8N6K7 520 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 FANCBQ8NB91 859 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 CAGE1Q8TC20 777 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 AFAP1L1Q8TED9 768 aa20.02■□□□□ 0.8
ECHDC1-216ENST00000479525 INPP4AQ96PE3 977 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms