RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
SSR1-206ENST00000479365 FERMT2Q96AC1 680 aa8.58□□□□□ -1.04
SSR1-206ENST00000479365 DDX11Q96FC9 970 aa8.58□□□□□ -1.04
SSR1-206ENST00000479365 KLF16Q9BXK1 252 aaPredicted RBP8.58□□□□□ -1.04
SSR1-206ENST00000479365 IL25Q9H293 177 aa8.58□□□□□ -1.04
SSR1-206ENST00000479365 XPNPEP3Q9NQH7 507 aa8.58□□□□□ -1.04
SSR1-206ENST00000479365 HOMER2Q9NSB8 354 aa8.58□□□□□ -1.04
SSR1-206ENST00000479365 NRBP1Q9UHY1 535 aa8.58□□□□□ -1.04
SSR1-206ENST00000479365 DDX49Q9Y6V7 483 aaKnown RBP8.58□□□□□ -1.04
SSR1-206ENST00000479365 ASTN1O14525 1302 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 ZNFX1Q9P2E3 1918 aaKnown RBP8.57□□□□□ -1.04
SSR1-206ENST00000479365 DNAH12Q6ZR08 3092 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 MYADML2A6NDP7 307 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 KBTBD13C9JR72 458 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 LCE2BO14633 110 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 PLA2G6O60733 806 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 ADAMTS4O75173 837 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 AKR1A1P14550 325 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 STAT2P52630 851 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 CNTN2Q02246 1040 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 SNX17Q15036 470 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 TRIM60Q495X7 471 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 MUM1L1Q5H9M0 696 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
SSR1-206ENST00000479365 CCDC174Q6PII3 467 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 SLC39A5Q6ZMH5 540 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 FAM160B2Q86V87 743 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 TRIM50Q86XT4 487 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 ANKRD35Q8N283 1001 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 CHST13Q8NET6 341 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 TMEM47Q9BQJ4 181 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 KATNBL1Q9H079 304 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 A1CFQ9NQ94 594 aaKnown RBP8.57□□□□□ -1.04
SSR1-206ENST00000479365 DNAAF2Q9NVR5 837 aaKnown RBP8.57□□□□□ -1.04
SSR1-206ENST00000479365 CXXC1Q9P0U4 656 aaPredicted RBP8.57□□□□□ -1.04
SSR1-206ENST00000479365 PRR12Q9ULL5 1215 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 ISY1Q9ULR0 285 aaKnown RBP8.57□□□□□ -1.04
SSR1-206ENST00000479365 PHF24Q9UPV7 400 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 ATP11BQ9Y2G3 1177 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 PCDHB11Q9Y5F2 797 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 PLXNA1Q9UIW2 1896 aa8.57□□□□□ -1.04
SSR1-206ENST00000479365 NEDD4P46934 1319 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 SYNGAP1Q96PV0 1343 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 SYNRGQ9UMZ2 1314 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 RARBP10826 455 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 GSPT1P15170 499 aaKnown RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 SLC16A2P36021 539 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 IRX6P78412 446 aaPredicted RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 IKQ13123 557 aaPredicted RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 AKNAD1Q5T1N1 836 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 RNF20Q5VTR2 975 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 CCSAPQ6IQ19 270 aaPredicted RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 CWC27Q6UX04 472 aaKnown RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 BTNL9Q6UXG8 535 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 ARMCX2Q7L311 632 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 TDHQ8IZJ6 230 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 SIX5Q8N196 739 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 MSL3Q8N5Y2 521 aaKnown RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 FAM133AQ8N9E0 248 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 CHURC1Q8WUH1 139 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 PURBQ96QR8 312 aaKnown RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 UBE2OQ9C0C9 1292 aaKnown RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 ACAD9Q9H845 621 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 TOMM22Q9NS69 142 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 RNF146Q9NTX7 359 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 TCP11L1Q9NUJ3 509 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 FBXO40Q9UH90 709 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 ZHX1Q9UKY1 873 aaPredicted RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 CNPY2Q9Y2B0 182 aa8.56□□□□□ -1.04
SSR1-206ENST00000479365 CTDP1Q9Y5B0 961 aaPredicted RBP8.56□□□□□ -1.04
SSR1-206ENST00000479365 FRMPD2Q68DX3 1309 aaPredicted RBP8.55□□□□□ -1.04
SSR1-206ENST00000479365 TRIM43BA6NCK2 446 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
SSR1-206ENST00000479365 PRMT3O60678 531 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 ICMTO60725 284 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 PDHBP11177 359 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 TOP1P11387 765 aaKnown RBP8.55□□□□□ -1.04
SSR1-206ENST00000479365 ALAS1P13196 640 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 PTGS1P23219 599 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 ITGB8P26012 769 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
SSR1-206ENST00000479365 CBLBQ13191 982 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 ACVR2BQ13705 512 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 CCDC96Q2M329 555 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 CCDC144BQ3MJ40 725 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 C1orf53Q5VUE5 145 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 MFSD6Q6ZSS7 791 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 CCDC144CPQ8IYA2 1237 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 FAM177A1Q8N128 213 aaPredicted RBP8.55□□□□□ -1.04
SSR1-206ENST00000479365 KLHDC9Q8NEP7 349 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 DCAF4Q8WV16 495 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 TRIM43Q96BQ3 446 aaPredicted RBP8.55□□□□□ -1.04
SSR1-206ENST00000479365 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 ZKSCAN3Q9BRR0 538 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 RANBP17Q9H2T7 1088 aaKnown RBP8.55□□□□□ -1.04
SSR1-206ENST00000479365 PDLIM7Q9NR12 457 aa8.55□□□□□ -1.04
SSR1-206ENST00000479365 FAM184BQ9ULE4 1060 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms