RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PWP2Q15269 919 aaKnown RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 LY6KQ17RY6 165 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 VPS53Q5VIR6 699 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 PTCRAQ6ISU1 281 aaPredicted RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 FAM117BQ6P1L5 589 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 CNKSR3Q6P9H4 555 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.77□□□□□ -1.17
VCP-205ENST00000479300 SESTD1Q86VW0 696 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 SMC5Q8IY18 1101 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 SCFD2Q8WU76 684 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 DCAF4Q8WV16 495 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 TBC1D5Q92609 795 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 FAM227BQ96M60 508 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 TGS1Q96RS0 853 aaKnown RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 PHOX2BQ99453 314 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 MPHOSPH6Q99547 160 aaKnown RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 RAD9AQ99638 391 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 GPCPD1Q9NPB8 672 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 GPHNQ9NQX3 736 aaPredicted RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 COL20A1Q9P218 1284 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 ADD3Q9UEY8 706 aaKnown RBP7.77□□□□□ -1.17
VCP-205ENST00000479300 CTNNA3Q9UI47 895 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 PNMA2Q9UL42 364 aa7.77□□□□□ -1.17
VCP-205ENST00000479300 USP34Q70CQ2 3546 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 A0A0D9SFI3 127 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 C19orf67A6NJJ6 358 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 NKRFO15226 690 aaKnown RBP eCLIP7.76□□□□□ -1.17
VCP-205ENST00000479300 KPNA6O60684 536 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 LGR5O75473 907 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 FGAP02671 866 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 FGRP09769 529 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 HSPD1P10809 573 aaKnown RBP7.76□□□□□ -1.17
VCP-205ENST00000479300 TOP1P11387 765 aaKnown RBP7.76□□□□□ -1.17
VCP-205ENST00000479300 HAND2P61296 217 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 HTRA4P83105 476 aaPredicted RBP7.76□□□□□ -1.17
VCP-205ENST00000479300 ZP2Q05996 745 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 PDE4DQ08499 809 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 NFKBIBQ15653 356 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 ZNF618Q5T7W0 954 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 RNF207Q6ZRF8 634 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 PIP4P2Q8N4L2 257 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 CAGE1Q8TC20 777 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 SP7Q8TDD2 431 aaPredicted RBP7.76□□□□□ -1.17
VCP-205ENST00000479300 ESR2Q92731 530 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 UIMC1Q96RL1 719 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 TMEM47Q9BQJ4 181 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 ZBED2Q9BTP6 218 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 CPVLQ9H3G5 476 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 HDAC6Q9UBN7 1215 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 GTF2IRD1Q9UHL9 959 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 MYO7AQ13402 2215 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 MICAL3Q7RTP6 2002 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 ZMYM6O95789 1325 aa7.76□□□□□ -1.17
VCP-205ENST00000479300 ABHD14A-ACY1A0A1B0GW23 586 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 B4DLN1 442 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 HAS3O00219 553 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 MAP3K13O43283 966 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 DCXO43602 365 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 ZNF286BP0CG31 522 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 SNHG28P0DPA3 235 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 PDHBP11177 359 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 SSTR3P32745 418 aaPredicted RBP7.75□□□□□ -1.17
VCP-205ENST00000479300 LTBRP36941 435 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 MRPL12P52815 198 aaKnown RBP7.75□□□□□ -1.17
VCP-205ENST00000479300 ZNF543Q08ER8 600 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
VCP-205ENST00000479300 TCEAL5Q5H9L2 206 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 CWC27Q6UX04 472 aaKnown RBP7.75□□□□□ -1.17
VCP-205ENST00000479300 HFE2Q6ZVN8 426 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 IQCA1Q86XH1 822 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 PLEKHM2Q8IWE5 1019 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 ZNF579Q8NAF0 562 aaKnown RBP7.75□□□□□ -1.17
VCP-205ENST00000479300 FBXO22Q8NEZ5 403 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 RUFY2Q8WXA3 655 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 MRPL38Q96DV4 380 aaKnown RBP7.75□□□□□ -1.17
VCP-205ENST00000479300 TTC14Q96N46 770 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 TAAR1Q96RJ0 339 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 TCP11L1Q9NUJ3 509 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 TECTAO75443 2155 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 KIAA1217Q5T5P2 1943 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 COL4A6Q14031 1691 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 WDR19Q8NEZ3 1342 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 RAD50Q92878 1312 aa7.75□□□□□ -1.17
VCP-205ENST00000479300 CFAP54Q96N23 3096 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 DHX16O60231 1041 aaKnown RBP7.74□□□□□ -1.17
VCP-205ENST00000479300 F2P00734 622 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 GH1P01241 217 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 IGHDP01880 384 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 LINC00271P0C7V0 271 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 HOXD8P13378 290 aaPredicted RBP7.74□□□□□ -1.17
VCP-205ENST00000479300 ALADP13716 330 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 IRS1P35568 1242 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 PSEN2P49810 448 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 DLX2Q07687 328 aaPredicted RBP7.74□□□□□ -1.17
VCP-205ENST00000479300 TRDNQ13061 729 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 EPC2Q52LR7 807 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms