RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 ZMYND8Q9ULU4 1186 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-211ENST00000479100 LRRC37A2A6NM11 1700 aa17.33■□□□□ 0.37
COL16A1-211ENST00000479100 SORBS3O60504 671 aa17.33■□□□□ 0.36
COL16A1-211ENST00000479100 ARIH2O95376 493 aa17.33■□□□□ 0.36
COL16A1-211ENST00000479100 C6orf222P0C671 652 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-211ENST00000479100 NR5A1Q13285 461 aa17.33■□□□□ 0.36
COL16A1-211ENST00000479100 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.36
COL16A1-211ENST00000479100 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.36
COL16A1-211ENST00000479100 LY6KQ17RY6 165 aa17.33■□□□□ 0.36
COL16A1-211ENST00000479100 DUSP28Q4G0W2 176 aa17.33■□□□□ 0.36
COL16A1-211ENST00000479100 OR6J1Q8NGC5 347 aa17.33■□□□□ 0.36
COL16A1-211ENST00000479100 TBCKQ8TEA7 893 aa17.33■□□□□ 0.36
COL16A1-211ENST00000479100 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 BTBD18B2RXH4 712 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 H3BQV1 296 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 M0R2N6 131 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 ITGB5P18084 799 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 LRRC26Q2I0M4 334 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 CCDC62Q6P9F0 684 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 KCNV1Q6PIU1 500 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 PIK3AP1Q6ZUJ8 805 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 RNF180Q86T96 592 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 TLK2Q86UE8 772 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 ARRDC4Q8NCT1 418 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 INPP4AQ96PE3 977 aaPredicted RBP17.32■□□□□ 0.36
COL16A1-211ENST00000479100 MXRA8Q9BRK3 442 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 PKD2L1Q9P0L9 805 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 UBIAD1Q9Y5Z9 338 aa17.32■□□□□ 0.36
COL16A1-211ENST00000479100 SOX1O00570 391 aaPredicted RBP17.31■□□□□ 0.36
COL16A1-211ENST00000479100 NKRFO15226 690 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL16A1-211ENST00000479100 FIBPO43427 364 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 IRX5P78411 483 aaPredicted RBP17.31■□□□□ 0.36
COL16A1-211ENST00000479100 MTMR1Q13613 665 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 LRRC41Q15345 812 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 INF2Q27J81 1249 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 CEP55Q53EZ4 464 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
COL16A1-211ENST00000479100 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 CYP2W1Q8TAV3 490 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 JADE2Q9NQC1 790 aa17.31■□□□□ 0.36
COL16A1-211ENST00000479100 DDX41Q9UJV9 622 aaKnown RBP17.31■□□□□ 0.36
COL16A1-211ENST00000479100 GNEQ9Y223 722 aaKnown RBP17.31■□□□□ 0.36
COL16A1-211ENST00000479100 ALPK3Q96L96 1907 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 FAM205CA6NFA0 338 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 SPATA31C2B4DYI2 1134 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 KBTBD13C9JR72 458 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 DNM1LO00429 736 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 GGPS1O95749 300 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 GH1P01241 217 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 CYP3A4P08684 503 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 TGFB3P10600 412 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 SYN1P17600 705 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 ICAM3P32942 547 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 GJA9P57773 515 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 BEX3Q00994 111 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 GNASQ5JWF2 1037 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 PLA2G4DQ86XP0 818 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 DHX37Q8IY37 1157 aaKnown RBP17.3■□□□□ 0.36
COL16A1-211ENST00000479100 GPRASP2Q96D09 838 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 INTS4Q96HW7 963 aaKnown RBP17.3■□□□□ 0.36
COL16A1-211ENST00000479100 CDHR1Q96JP9 859 aa17.3■□□□□ 0.36
COL16A1-211ENST00000479100 MYADML2A6NDP7 307 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 FAM86B1E9PN63 330 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 FAM86B2P0C5J1 330 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 UBA1P22314 1058 aaKnown RBP17.29■□□□□ 0.36
COL16A1-211ENST00000479100 MAGEA10P43363 369 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-211ENST00000479100 USP11P51784 963 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 SP2Q02086 613 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 LETM2Q2VYF4 491 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 PRR16Q569H4 304 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
COL16A1-211ENST00000479100 CRYGNQ8WXF5 182 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 UIMC1Q96RL1 719 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 UPF3AQ9H1J1 476 aaKnown RBP17.29■□□□□ 0.36
COL16A1-211ENST00000479100 MLXIPQ9HAP2 919 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 Q9Y3F1 56 aa17.29■□□□□ 0.36
COL16A1-211ENST00000479100 DNAH12Q6ZR08 3092 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 KIAA1217Q5T5P2 1943 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 MEIS1O00470 390 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 ARP10275 920 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 ARHGAP1Q07960 439 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 BECN1Q14457 450 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 KCNA10Q16322 511 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
COL16A1-211ENST00000479100 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-211ENST00000479100 CYFIP1Q7L576 1253 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 FERMT2Q96AC1 680 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 SENP6Q9GZR1 1112 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-211ENST00000479100 KCNH7Q9NS40 1196 aa17.28■□□□□ 0.36
COL16A1-211ENST00000479100 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-211ENST00000479100 ZEB2O60315 1214 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 ATP9AO75110 1047 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 TDP2O95551 362 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 PDCP20941 246 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms