RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 RUFY1Q96T51 708 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 TANGO6Q9C0B7 1094 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 KBTBD4Q9NVX7 518 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 FAM184BQ9ULE4 1060 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 SNX12Q9UMY4 172 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 TARSL2A2RTX5 802 aaKnown RBP12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCNE1P24864 410 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 MIIPQ5JXC2 388 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 INTS5Q6P9B9 1019 aaKnown RBP12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 B4GALNT2Q8NHY0 566 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 TRIM9Q9C026 710 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 IL17RBQ9NRM6 502 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 MINPP1Q9UNW1 487 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 PCDHA13Q9Y5I0 950 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 CYTH3O43739 400 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 CAMTA2O94983 1202 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 IMPDH2P12268 514 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 KIF11P52732 1056 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 TDRD12Q587J7 1177 aaKnown RBP12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 ARL8AQ96BM9 186 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 RPGRIP1Q96KN7 1286 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCDC114Q96M63 670 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 KANSL2Q9H9L4 492 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 NLRC4Q9NPP4 1024 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 PCDHGA4Q9Y5G9 962 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 BCL9O00512 1426 aa12.17□□□□□ -0.46
LRRFIP1-211ENST00000478958 ZSCAN5CA6NGD5 496 aaPredicted RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 ZEB2O60315 1214 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 TXKP42681 527 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 RASSF7Q02833 373 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 ARID5AQ03989 594 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 GFPT1Q06210 699 aaPredicted RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 LRRC41Q15345 812 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLC35G1Q2M3R5 365 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 IQCEQ6IPM2 695 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLC30A9Q6PML9 568 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SPATA21Q7Z572 469 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 MYLK4Q86YV6 388 aaPredicted RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCDC170Q8IYT3 715 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 TSEN2Q8NCE0 465 aaKnown RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 TRIM58Q8NG06 486 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 IFT81Q8WYA0 676 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 NUP58Q9BVL2 599 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 BIN2Q9UBW5 565 aaPredicted RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SALL4Q9UJQ4 1053 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 GRIN2DO15399 1336 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 GOLGB1Q14789 3259 aaKnown RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 TIAM2Q8IVF5 1701 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 KRT14P02533 472 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 NAPAP54920 295 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 USP4Q13107 963 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SF3B2Q13435 895 aaKnown RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 PTPROQ16827 1216 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 CYB5D1Q6P9G0 228 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 HOOK2Q96ED9 719 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 OSBPL9Q96SU4 736 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 ANO9A1A5B4 782 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 BICDL2A1A5D9 508 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 LRRC53A6NM62 1247 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 ORC4O43929 436 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 TSPY3P0CV98 308 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 TSPY8P0CW00 308 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 MAGEA1P43355 309 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 PDCLQ13371 301 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLC51AQ86UW1 340 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 FAM228AQ86W67 206 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SEMA6BQ9H3T3 888 aa12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 SAP30BPQ9UHR5 308 aaKnown RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 TPX2Q9ULW0 747 aaKnown RBP12.16□□□□□ -0.46
LRRFIP1-211ENST00000478958 AHCYL1O43865 530 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 FGRP09769 529 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 GUCY2FP51841 1108 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 CACNA2D4Q7Z3S7 1137 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 YTHDF3Q7Z739 585 aaKnown RBP12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 DZIP1Q86YF9 867 aaKnown RBP12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 KIAA0895Q8NCT3 520 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 AENQ8WTP8 325 aaKnown RBP12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 TSGA10Q9BZW7 698 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 RBM12Q9NTZ6 932 aaKnown RBP12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 BLOC1S6Q9UL45 172 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 PACSIN2Q9UNF0 486 aaPredicted RBP12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 TOGARAM1Q9Y4F4 1720 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 APBA1Q02410 837 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 ITPK1Q13572 414 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 UBE4AQ14139 1066 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 PDIA5Q14554 519 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 C8orf74Q6P047 294 aa12.15□□□□□ -0.46
LRRFIP1-211ENST00000478958 MIS18BP1Q6P0N0 1132 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms