RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 DIO2Q92813 273 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 TMEM169Q96HH4 297 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 ZSWIM3Q96MP5 696 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 NOX5Q96PH1 765 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.33□□□□□ -2.042e-23■■■■□ 20.2
SRRM1-211ENST00000478890 MTA3Q9BTC8 594 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 VPS11Q9H270 941 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 L2HGDHQ9H9P8 463 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 PCDH18Q9HCL0 1135 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 JADE2Q9NQC1 790 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 TIMM13Q9Y5L4 95 aaPredicted RBP2.33□□□□□ -2.04
SRRM1-211ENST00000478890 B2RBV5 119 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 SMAD7O15105 426 aaKnown RBP2.32□□□□□ -2.04
SRRM1-211ENST00000478890 MAFKO60675 156 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 ITGB3P05106 788 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 C8BP07358 591 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 THBS2P35442 1172 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 STAT5AP42229 794 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 CASP7P55210 303 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 NKX3-2P78367 333 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 KIAA2012Q0VF49 1180 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 MROH9Q5TGP6 573 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 MBLAC2Q68D91 279 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 MCTP2Q6DN12 878 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 SPRED1Q7Z699 444 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF761Q86XN6 746 aaPredicted RBP2.32□□□□□ -2.04
SRRM1-211ENST00000478890 DNAJC10Q8IXB1 793 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 FAM178BQ8IXR5 827 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 LGI4Q8N135 537 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 TTLL6Q8N841 843 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 KYQ8NBH2 561 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 ADAMTS17Q8TE56 1095 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 CPA5Q8WXQ8 436 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 COPS5Q92905 334 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 CLIC6Q96NY7 704 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 MMP19Q99542 508 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 GORASP1Q9BQQ3 440 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 C11orf84Q9BUA3 381 aaPredicted RBP2.32□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF747Q9BV97 191 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 LNPKQ9C0E8 428 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 NKX2-4Q9H2Z4 354 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 NGRNQ9NPE2 291 aaKnown RBP2.32□□□□□ -2.04
SRRM1-211ENST00000478890 CYP26B1Q9NR63 512 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 CROTQ9UKG9 612 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 PCDHB4Q9Y5E5 795 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 PCDHA2Q9Y5H9 948 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 HS3ST3A1Q9Y663 406 aa2.32□□□□□ -2.04
SRRM1-211ENST00000478890 MROH6A6NGR9 719 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 KRIT1O00522 736 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 DDX3XO00571 662 aaKnown RBP eCLIP2.31□□□□□ -2.047e-9■■■■□ 21.4
SRRM1-211ENST00000478890 SGSM2O43147 1006 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 TBX1O43435 398 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 SUSD5O60279 629 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 NOBOXO60393 691 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 CYP7B1O75881 506 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 DGKIO75912 1065 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 CPP00450 1065 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 ITGAVP06756 1048 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 RPL13P26373 211 aaKnown RBP2.31□□□□□ -2.04
SRRM1-211ENST00000478890 LTBRP36941 435 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 BCL6P41182 706 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 SLC6A11P48066 632 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 ITGA1P56199 1179 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 FXNQ16595 210 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 INF2Q27J81 1249 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 PRSS53Q2L4Q9 553 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 STEAP3Q658P3 488 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 E4F1Q66K89 784 aaPredicted RBP2.31□□□□□ -2.04
SRRM1-211ENST00000478890 GLB1LQ6UWU2 654 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 EEPD1Q7L9B9 569 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 PLEKHH3Q7Z736 793 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF227Q86WZ6 799 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 FAM126BQ8IXS8 530 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 FAM26EQ8N5C1 309 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 PLEKHO2Q8TD55 490 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 FRS2Q8WU20 508 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 TOE1Q96GM8 510 aaKnown RBP2.31□□□□□ -2.04
SRRM1-211ENST00000478890 LCORQ96JN0 433 aaPredicted RBP2.31□□□□□ -2.04
SRRM1-211ENST00000478890 SAMD11Q96NU1 681 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 WRNIP1Q96S55 665 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 CLDND1Q9NY35 253 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 FTSJ1Q9UET6 329 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 DUSP10Q9Y6W6 482 aa2.31□□□□□ -2.04
SRRM1-211ENST00000478890 HGSO14964 777 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 PPP1R11O60927 126 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 PLATP00750 562 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 ATF4P18848 351 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 HOXC12P31275 282 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 DNAJA1P31689 397 aaKnown RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 DLX2Q07687 328 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 LSAMPQ13449 338 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 FAM26FQ5R3K3 315 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 TRMT10BQ6PF06 316 aaKnown RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 TMC5Q6UXY8 1006 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 USP53Q70EK8 1073 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 NLRP10Q86W26 655 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 MIB1Q86YT6 1006 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 RIOX2Q8IUF8 465 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 LINC00482Q8N8I6 264 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 TXNDC5Q8NBS9 432 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms