RNA–Protein interactions for RNA: ENST00000478285.1

TDP2-203, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 2

Gene TDP2, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-203ENST00000478285 RNF34Q969K3 372 aa8.61□□□□□ -1.03
TDP2-203ENST00000478285 STK31Q9BXU1 1019 aa8.61□□□□□ -1.03
TDP2-203ENST00000478285 GPATCH2Q9NW75 528 aa8.61□□□□□ -1.03
TDP2-203ENST00000478285 ZBTB1Q9Y2K1 713 aa8.61□□□□□ -1.03
TDP2-203ENST00000478285 USP16Q9Y5T5 823 aa8.61□□□□□ -1.03
TDP2-203ENST00000478285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
TDP2-203ENST00000478285 COL15A1P39059 1388 aa8.61□□□□□ -1.03
TDP2-203ENST00000478285 UBOX5O94941 541 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 CYP19A1P11511 503 aaPredicted RBP8.6□□□□□ -1.03
TDP2-203ENST00000478285 ZNF394Q53GI3 561 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 OGFOD2Q6N063 350 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 TEX13AQ9BXU3 409 aaPredicted RBP8.6□□□□□ -1.03
TDP2-203ENST00000478285 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 TFCP2L1Q9NZI6 479 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 CHPF2Q9P2E5 772 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 PCDHGB7Q9Y5F8 929 aa8.6□□□□□ -1.03
TDP2-203ENST00000478285 SPEF2Q9C093 1822 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 MYH3P11055 1940 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 CHMP4BP1P59074 171 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 AIMP1Q12904 312 aaKnown RBP8.59□□□□□ -1.03
TDP2-203ENST00000478285 CCDC30Q5VVM6 783 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 TSPYL5Q86VY4 417 aaPredicted RBP8.59□□□□□ -1.03
TDP2-203ENST00000478285 CREG2Q8IUH2 290 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 ATG4CQ96DT6 458 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 CCDC120Q96HB5 630 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 CNNM2Q9H8M5 875 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 GOLGA2P5Q9HBQ8 144 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 SMC4Q9NTJ3 1288 aa8.59□□□□□ -1.03
TDP2-203ENST00000478285 LAMB2P55268 1798 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 COL24A1Q17RW2 1714 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 MEIS3P2A8K0S8 358 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
TDP2-203ENST00000478285 HOXB7P09629 217 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 GDNFP39905 211 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 AFMP43652 599 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 R3HDM1Q15032 1099 aaKnown RBP8.58□□□□□ -1.04
TDP2-203ENST00000478285 PROSER3Q2NL68 480 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 KIF6Q6ZMV9 814 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 NLRC3Q7RTR2 1065 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.58□□□□□ -1.04
TDP2-203ENST00000478285 SLAMF8Q9P0V8 285 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 DUSP13Q9UII6 198 aa8.58□□□□□ -1.04
TDP2-203ENST00000478285 SOS1Q07889 1333 aaPredicted RBP8.57□□□□□ -1.04
TDP2-203ENST00000478285 VAMP4O75379 141 aa8.57□□□□□ -1.04
TDP2-203ENST00000478285 POLR2BP30876 1174 aaKnown RBP8.57□□□□□ -1.04
TDP2-203ENST00000478285 RNF4P78317 190 aa8.57□□□□□ -1.04
TDP2-203ENST00000478285 SLC15A2Q16348 729 aa8.57□□□□□ -1.04
TDP2-203ENST00000478285 LRRFIP1Q32MZ4 808 aaKnown RBP8.57□□□□□ -1.04
TDP2-203ENST00000478285 ZSWIM9Q86XI8 627 aa8.57□□□□□ -1.04
TDP2-203ENST00000478285 TRMT2AQ8IZ69 625 aaKnown RBP8.57□□□□□ -1.04
TDP2-203ENST00000478285 TMEM40Q8WWA1 233 aa8.57□□□□□ -1.04
TDP2-203ENST00000478285 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
TDP2-203ENST00000478285 DBF4Q9UBU7 674 aaPredicted RBP8.57□□□□□ -1.04
TDP2-203ENST00000478285 PNPLA7Q6ZV29 1317 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 SHISA3A0PJX4 238 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 RPS6KA4O75676 772 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 HMGB2P26583 209 aaKnown RBP8.56□□□□□ -1.04
TDP2-203ENST00000478285 RFC4P35249 363 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 IL6STP40189 918 aaPredicted RBP8.56□□□□□ -1.04
TDP2-203ENST00000478285 RACK1P63244 317 aaKnown RBP8.56□□□□□ -1.04
TDP2-203ENST00000478285 KCNMB1Q16558 191 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 FRAT1Q92837 279 aaPredicted RBP8.56□□□□□ -1.04
TDP2-203ENST00000478285 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
TDP2-203ENST00000478285 DDX21Q9NR30 783 aaKnown RBP eCLIP8.56□□□□□ -1.04
TDP2-203ENST00000478285 SRP68Q9UHB9 627 aaKnown RBP8.56□□□□□ -1.04
TDP2-203ENST00000478285 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
TDP2-203ENST00000478285 DDX60Q8IY21 1712 aaKnown RBP8.55□□□□□ -1.04
TDP2-203ENST00000478285 DNAJC25-GNG10A0A024R161 153 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 NME1P15531 152 aaKnown RBP8.55□□□□□ -1.04
TDP2-203ENST00000478285 CCNFP41002 786 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 EGR3Q06889 387 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 RAD51AP2Q09MP3 1159 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 RALGPS1Q5JS13 557 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 FYB2Q5VWT5 728 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 TTLL7Q6ZT98 887 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 G2E3Q7L622 706 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 TTC6Q86TZ1 520 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 POU5F2Q8N7G0 328 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 SSH1Q8WYL5 1049 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 ZNF428Q96B54 188 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 MRRFQ96E11 262 aaKnown RBP8.55□□□□□ -1.04
TDP2-203ENST00000478285 PHAXQ9H814 394 aaKnown RBP8.55□□□□□ -1.04
TDP2-203ENST00000478285 HYPKQ9NX55 129 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 TMEM59LQ9UK28 342 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 ZNRF3Q9ULT6 936 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 ANKRD31Q8N7Z5 1873 aa8.55□□□□□ -1.04
TDP2-203ENST00000478285 TNRC6CQ9HCJ0 1690 aaKnown RBP8.54□□□□□ -1.04
TDP2-203ENST00000478285 A0A087WZG4 1122 aa8.54□□□□□ -1.04
TDP2-203ENST00000478285 TNFRSF10CO14798 259 aa8.54□□□□□ -1.04
TDP2-203ENST00000478285 BCAR3O75815 825 aa8.54□□□□□ -1.04
TDP2-203ENST00000478285 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
TDP2-203ENST00000478285 NBPF12Q5TAG4 269 aaPredicted RBP8.54□□□□□ -1.04
TDP2-203ENST00000478285 COPS6Q7L5N1 327 aa8.54□□□□□ -1.04
TDP2-203ENST00000478285 COL23A1Q86Y22 540 aaPredicted RBP8.54□□□□□ -1.04
TDP2-203ENST00000478285 KIRREL1Q96J84 757 aa8.54□□□□□ -1.04
TDP2-203ENST00000478285 RCAN3Q9UKA8 241 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms