RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 TRDNQ13061 729 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 PGM5Q15124 567 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 STOX1Q6ZVD7 989 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 HOMER1Q86YM7 354 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 MTMR8Q96EF0 704 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 SPATA33Q96N06 139 aa13.65□□□□□ -0.22
CPSF7-211ENST00000477890 NECAB3Q96P71 396 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-211ENST00000477890 HAS3O00219 553 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 PPFIA4O75335 1185 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 GGPS1O95749 300 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 ZNF200P98182 395 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-211ENST00000477890 PTK7Q13308 1070 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 GRB10Q13322 594 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 HSDL1Q3SXM5 330 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 CELF3Q5SZQ8 465 aaKnown RBP13.64□□□□□ -0.23
CPSF7-211ENST00000477890 MYSM1Q5VVJ2 828 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 KCNV1Q6PIU1 500 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 IL31RAQ8NI17 732 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 WNT8BQ93098 351 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 ZFP91Q96JP5 570 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-211ENST00000477890 PIGSQ96S52 555 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
CPSF7-211ENST00000477890 REV3LO60673 3130 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 ABHD14A-ACY1A0A1B0GW23 586 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 GCOM1H8Y6P7 765 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-211ENST00000477890 RBAK-RBAKDNI3L0D1 243 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 POLR2MP0CAP2 368 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 HOXD8P13378 290 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-211ENST00000477890 UBA1P22314 1058 aaKnown RBP13.63□□□□□ -0.23
CPSF7-211ENST00000477890 SP2Q02086 613 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 IKBKEQ14164 716 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 GRM4Q14833 912 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 TRIM71Q2Q1W2 868 aaKnown RBP13.63□□□□□ -0.23
CPSF7-211ENST00000477890 ZNF618Q5T7W0 954 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 VSIG10LQ86VR7 867 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 MLXIPQ9HAP2 919 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 TRANK1O15050 2925 aa13.63□□□□□ -0.23
CPSF7-211ENST00000477890 ERICH2A1L162 156 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 IFIT3O14879 490 aaKnown RBP13.62□□□□□ -0.23
CPSF7-211ENST00000477890 LPXNO60711 386 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 GJB5O95377 273 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 CYP21A2P08686 494 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
CPSF7-211ENST00000477890 CCND2P30279 289 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 TRAF1Q13077 416 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 HIC1Q14526 733 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 TTC22Q5TAA0 569 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 FAM117BQ6P1L5 589 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 TRAF7Q6Q0C0 670 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 GDPD5Q8WTR4 605 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.233e-7■■■■□ 21.6
CPSF7-211ENST00000477890 RAD9AQ99638 391 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 RIOX1Q9H6W3 641 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 SENP2Q9HC62 589 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 COG5Q9UP83 839 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-211ENST00000477890 SIP14410 1827 aa13.62□□□□□ -0.23
CPSF7-211ENST00000477890 CYTH3O43739 400 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 EFCAB14O75071 495 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 TGFB3P10600 412 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 PDE4AP27815 886 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 THPOP40225 353 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 PTH1RQ03431 593 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 MBTPS1Q14703 1052 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 WTAPQ15007 396 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 RALYLQ86SE5 291 aaKnown RBP13.61□□□□□ -0.23
CPSF7-211ENST00000477890 RUFY2Q8WXA3 655 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 HLA-CQ95604 372 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 C16orf70Q9BSU1 422 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 MICAL3Q7RTP6 2002 aa13.61□□□□□ -0.23
CPSF7-211ENST00000477890 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 C17orf102A2RUQ5 167 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 H3BRB1 525 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 LGR5O75473 907 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 SART3Q15020 963 aaKnown RBP13.6□□□□□ -0.23
CPSF7-211ENST00000477890 SERINC5Q86VE9 423 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 NCOA7Q8NI08 942 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 ATP6V0A1Q93050 837 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 TGS1Q96RS0 853 aaKnown RBP13.6□□□□□ -0.23
CPSF7-211ENST00000477890 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
CPSF7-211ENST00000477890 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 SUGCTQ9HAC7 445 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
CPSF7-211ENST00000477890 RSPH10B2B2RC85 870 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 E7EWF7 191 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 NOP56O00567 594 aaKnown RBP13.59□□□□□ -0.23
CPSF7-211ENST00000477890 LGALS2P05162 132 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 RSPH10BP0C881 870 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 SMIM10L2AP0DMW4 78 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms