RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MOXD1Q6UVY6 613 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 NLRX1Q86UT6 975 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 TRPV1Q8NER1 839 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 NAP1L4Q99733 375 aaKnown RBP17.41■□□□□ 0.38
SEC13-215ENST00000477547 RNF208Q9H0X6 261 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 NR2E3Q9Y5X4 410 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 UBIAD1Q9Y5Z9 338 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 LAMA3Q16787 3333 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 FAM86B1E9PN63 330 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 FIBPO43427 364 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 CCNT1O60563 726 aaKnown RBP17.4■□□□□ 0.38
SEC13-215ENST00000477547 RGS20O76081 388 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 FAM86B2P0C5J1 330 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 ZNF865P0CJ78 1059 aaPredicted RBP17.4■□□□□ 0.38
SEC13-215ENST00000477547 ITGB5P18084 799 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 CIITAP33076 1130 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 MTMR1Q13613 665 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 PRR16Q569H4 304 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 MYSM1Q5VVJ2 828 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 SCFD2Q8WU76 684 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 GPRASP2Q96D09 838 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 MXRA8Q9BRK3 442 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 ZSCAN16Q9H4T2 348 aaPredicted RBP17.4■□□□□ 0.38
SEC13-215ENST00000477547 MRVI1Q9Y6F6 885 aa17.4■□□□□ 0.38
SEC13-215ENST00000477547 IGLV3-22A0A075B6J6 115 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 WNT7AO00755 349 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 EDIL3O43854 480 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 BRD1O95696 1058 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 CNGA1P29973 690 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 CCND3P30281 292 aaPredicted RBP17.39■□□□□ 0.37
SEC13-215ENST00000477547 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 CCDC144BQ3MJ40 725 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 RILPL1Q5EBL4 403 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 TAPT1Q6NXT6 567 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 NIPA1Q7RTP0 329 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 WDR11Q9BZH6 1224 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 JADE2Q9NQC1 790 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 PDGFCQ9NRA1 345 aa17.39■□□□□ 0.37
SEC13-215ENST00000477547 DDX25Q9UHL0 483 aaKnown RBP17.39■□□□□ 0.37
SEC13-215ENST00000477547 SLC37A4O43826 429 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 NEMFO60524 1076 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 FARP2O94887 1054 aaPredicted RBP17.38■□□□□ 0.37
SEC13-215ENST00000477547 AKR1A1P14550 325 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 SEMA3FQ13275 785 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 NBR1Q14596 966 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 TTLL4Q14679 1199 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 PPP4R3AQ6IN85 833 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 U2AF1L4Q8WU68 220 aaKnown RBP17.38■□□□□ 0.37
SEC13-215ENST00000477547 LENG9Q96B70 501 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
SEC13-215ENST00000477547 CDHR1Q96JP9 859 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 HMX1Q9NP08 348 aaPredicted RBP17.38■□□□□ 0.37
SEC13-215ENST00000477547 PKD2L1Q9P0L9 805 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 CUL9Q8IWT3 2517 aa17.38■□□□□ 0.37
SEC13-215ENST00000477547 MYH9P35579 1960 aaKnown RBP17.37■□□□□ 0.37
SEC13-215ENST00000477547 CYP3A7-CYP3A51PA0A087WV96 503 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.37■□□□□ 0.37
SEC13-215ENST00000477547 RBM47A0AV96 593 aaKnown RBP17.37■□□□□ 0.37
SEC13-215ENST00000477547 MEIS1O00470 390 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 SEPT4O43236 478 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 ARIH2O95376 493 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 UBA1P22314 1058 aaKnown RBP17.37■□□□□ 0.37
SEC13-215ENST00000477547 CYP3A7P24462 503 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 ICAM3P32942 547 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 MCM7P33993 719 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 NUCB2P80303 420 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 MBOAT7Q96N66 472 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.371e-7■■□□□ 12.5
SEC13-215ENST00000477547 UNC93B1Q9H1C4 597 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 KCNH7Q9NS40 1196 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 FAM184BQ9ULE4 1060 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 CIZ1Q9ULV3 898 aaPredicted RBP17.37■□□□□ 0.37
SEC13-215ENST00000477547 ZDHHC9Q9Y397 364 aa17.37■□□□□ 0.37
SEC13-215ENST00000477547 ADCY6O43306 1168 aa17.36■□□□□ 0.37
SEC13-215ENST00000477547 ARP10275 920 aa17.36■□□□□ 0.37
SEC13-215ENST00000477547 TXNP10599 105 aaKnown RBP17.36■□□□□ 0.37
SEC13-215ENST00000477547 MNX1P50219 401 aaPredicted RBP17.36■□□□□ 0.37
SEC13-215ENST00000477547 TOB1P50616 345 aaPredicted RBP17.36■□□□□ 0.37
SEC13-215ENST00000477547 TNFAIP2Q03169 654 aa17.36■□□□□ 0.37
SEC13-215ENST00000477547 ORC2Q13416 577 aaPredicted RBP17.36■□□□□ 0.37
SEC13-215ENST00000477547 Q4G0T1 1027 aa17.36■□□□□ 0.37
SEC13-215ENST00000477547 GJC2Q5T442 439 aaPredicted RBP17.36■□□□□ 0.37
SEC13-215ENST00000477547 KCNV1Q6PIU1 500 aa17.36■□□□□ 0.37
SEC13-215ENST00000477547 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
SEC13-215ENST00000477547 A0A1W2PPC1 479 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 SPATA31C2B4DYI2 1134 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 EVI5O60447 810 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 SMPD1P17405 629 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 ZNF174Q15697 407 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 LY6KQ17RY6 165 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 ANO1Q5XXA6 986 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 IQSEC1Q6DN90 963 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 CCDC62Q6P9F0 684 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 TLK2Q86UE8 772 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms