RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CTSHP09668 335 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 NOVP48745 357 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 PTK7Q13308 1070 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 ALX1Q15699 326 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 PTPROQ16827 1216 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 QRICH1Q2TAL8 776 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 ZNF589Q86UQ0 364 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 SESTD1Q86VW0 696 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 IQCA1Q86XH1 822 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 ZFP91Q96JP5 570 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 SPATA33Q96N06 139 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 TTC14Q96N46 770 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 CTAGE1Q96RT6 745 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 C11orf16Q9NQ32 467 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 COL20A1Q9P218 1284 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 DDX41Q9UJV9 622 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 MRPL11Q9Y3B7 192 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 INSL6Q9Y581 213 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 PCDHB15Q9Y5E8 787 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 MUC6Q6W4X9 2439 aa7.79□□□□□ -1.16
RTFDC1-206ENST00000477485 EMSYQ7Z589 1322 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 C17orf102A2RUQ5 167 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 PRR33A8MZF0 331 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 RSPH10B2B2RC85 870 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 B4E1Z4 1266 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 ABCB7O75027 752 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 EIF3JO75822 258 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 GGPS1O95749 300 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 F2P00734 622 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 NR3C2P08235 984 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 FGRP09769 529 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 PARP1P09874 1014 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 RSPH10BP0C881 870 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 SNHG28P0DPA3 235 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 ALADP13716 330 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 GPM6BQ13491 265 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 LAMC2Q13753 1193 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 GPNMBQ14956 572 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 CLUL1Q15846 466 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 LEXMQ3ZCV2 418 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 TIGD5Q53EQ6 642 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 ASPRV1Q53RT3 343 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 FAM178BQ8IXR5 827 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 DBF4BQ8NFT6 615 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 PPTC7Q8NI37 304 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 ATP6V0A1Q93050 837 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 WNT8BQ93098 351 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 MRPL38Q96DV4 380 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 IWS1Q96ST2 819 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 MLXIPQ9HAP2 919 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 PXMP2Q9NR77 195 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 CLDND1Q9NY35 253 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 CTNNA3Q9UI47 895 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 ARIH1Q9Y4X5 557 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 ZMYM6O95789 1325 aa7.78□□□□□ -1.16
RTFDC1-206ENST00000477485 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 NOP56O00567 594 aaKnown RBP7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 PCP11498 1178 aaKnown RBP7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 HOXA13P31271 388 aaPredicted RBP7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 CTNNB1P35222 781 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 PDE1AP54750 535 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 SP4Q02446 784 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 MBTPS1Q14703 1052 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 HSDL1Q3SXM5 330 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 EPC2Q52LR7 807 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 CCDC178Q5BJE1 867 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 FCHSD1Q86WN1 690 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 DGKHQ86XP1 1220 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 HOMER1Q86YM7 354 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 SEPT8Q92599 483 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 ZSCAN10Q96SZ4 725 aaPredicted RBP7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 UBAC1Q9BSL1 405 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 AMNQ9BXJ7 453 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 IFIH1Q9BYX4 1025 aaKnown RBP7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 DIAPH3Q9NSV4 1193 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 FAM50BQ9Y247 325 aa7.77□□□□□ -1.17
RTFDC1-206ENST00000477485 GRXCR2A6NFK2 248 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 TREHO43280 583 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 DCXO43602 365 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 UBA1P22314 1058 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 CCND2P30279 289 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 RBL2Q08999 1139 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 PGM5Q15124 567 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 TRIM71Q2Q1W2 868 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 PUS10Q3MIT2 529 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 TCEAL5Q5H9L2 206 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 IFIT1BQ5T764 474 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 UTP14CQ5TAP6 766 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 B4GALNT3Q6L9W6 998 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 KCNV1Q6PIU1 500 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 CWC27Q6UX04 472 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 TMEM192Q8IY95 271 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 ENAHQ8N8S7 591 aaPredicted RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 EMID1Q96A84 441 aaPredicted RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 SAMD11Q96NU1 681 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 LNPKQ9C0E8 428 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms