RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 PABPC4Q13310 644 aaKnown RBP eCLIP9.23□□□□□ -0.93
KPNA1-206ENST00000476916 EIF4A2Q14240 407 aaKnown RBP9.23□□□□□ -0.93
KPNA1-206ENST00000476916 PPP2R5AQ15172 486 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 CRY2Q49AN0 593 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 RASIP1Q5U651 963 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 DHX32Q7L7V1 743 aaKnown RBP9.23□□□□□ -0.93
KPNA1-206ENST00000476916 EEPD1Q7L9B9 569 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 RNF180Q86T96 592 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 SUPT20HQ8NEM7 779 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 ZKSCAN4Q969J2 545 aaPredicted RBP9.23□□□□□ -0.93
KPNA1-206ENST00000476916 CLMNQ96JQ2 1002 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 TMEM39AQ9NV64 488 aa9.23□□□□□ -0.93
KPNA1-206ENST00000476916 ANGEL1Q9UNK9 670 aaKnown RBP9.23□□□□□ -0.93
KPNA1-206ENST00000476916 CHD7Q9P2D1 2997 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 UPK3BL1B0FP48 263 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 UPK3BL2E5RIL1 263 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
KPNA1-206ENST00000476916 BNIP3LO60238 219 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 TLR2O60603 784 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 BPNT1O95861 308 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 PSMC4P43686 418 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 HGSNATQ68CP4 663 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 TTC6Q86TZ1 520 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 RMDN1Q96DB5 314 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 HHIPQ96QV1 700 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 SLC30A3Q99726 388 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 PRRX2Q99811 253 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
KPNA1-206ENST00000476916 PCDHB14Q9Y5E9 798 aa9.22□□□□□ -0.93
KPNA1-206ENST00000476916 COL1A1P02452 1464 aaPredicted RBP9.21□□□□□ -0.93
KPNA1-206ENST00000476916 PLIN1O60240 522 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 ADCY3O60266 1144 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 MCL1Q07820 350 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 LRRC26Q2I0M4 334 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 TIFAQ96CG3 184 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 EVI5LQ96CN4 794 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 TM9SF2Q99805 663 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 COMMD10Q9Y6G5 202 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 VPS13AQ96RL7 3174 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 PTPN13Q12923 2485 aa9.21□□□□□ -0.94
KPNA1-206ENST00000476916 SLC35F4A4IF30 521 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 PRR23AA6NEV1 266 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 FAM187AA6NFU0 413 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 H7C1W4 665 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 HOXA10P31260 410 aaPredicted RBP9.2□□□□□ -0.94
KPNA1-206ENST00000476916 PRKCZQ05513 592 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 PPP2R3AQ06190 1150 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 AMOTQ4VCS5 1084 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 C4orf46Q504U0 113 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 RIPOR1Q6ZS17 1223 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 AFAP1L2Q8N4X5 818 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 UBR7Q8N806 425 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 BHMTQ93088 406 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 NSUN5Q96P11 429 aaKnown RBP9.2□□□□□ -0.94
KPNA1-206ENST00000476916 FZD1Q9UP38 647 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 MAPRE3Q9UPY8 281 aa9.2□□□□□ -0.94
KPNA1-206ENST00000476916 POLR3KQ9Y2Y1 108 aaPredicted RBP9.2□□□□□ -0.94
KPNA1-206ENST00000476916 ANKRD17O75179 2603 aaKnown RBP9.2□□□□□ -0.94
KPNA1-206ENST00000476916 GSG1L2A8MUP6 293 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 PDE2AO00408 941 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 CAMTA2O94983 1202 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 RASGRP1O95267 797 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 U2AF1L5P0DN76 240 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 NME2P22392 152 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 GUCY2CP25092 1073 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 ZNF280AP59817 542 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 GPLD1P80108 840 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 U2AF1Q01081 240 aaKnown RBP eCLIP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 RPL6Q02878 288 aaKnown RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 OS9Q13438 667 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 CBX2Q14781 532 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 LRRC14Q15048 493 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 RALBP1Q15311 655 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 LRRFIP1Q32MZ4 808 aaKnown RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 PLEKHO1Q53GL0 409 aaPredicted RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 WWC2Q6AWC2 1192 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 LRRC47Q8N1G4 583 aaKnown RBP9.19□□□□□ -0.94
KPNA1-206ENST00000476916 BRI3BPQ8WY22 251 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 SLC39A13Q96H72 371 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 PBX4Q9BYU1 374 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 SLC12A7Q9Y666 1083 aa9.19□□□□□ -0.94
KPNA1-206ENST00000476916 MEIS3P2A8K0S8 358 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 DCXO43602 365 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 KRT18P05783 430 aaKnown RBP9.18□□□□□ -0.94
KPNA1-206ENST00000476916 COL6A1P12109 1028 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 ELNP15502 786 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 MTHFSP49914 203 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 GUCY2FP51841 1108 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
KPNA1-206ENST00000476916 HLTFQ14527 1009 aaKnown RBP eCLIP9.18□□□□□ -0.94
KPNA1-206ENST00000476916 NCAPHQ15003 741 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 LRRC41Q15345 812 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 DBN1Q16643 649 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 ZNF530Q6P9A1 599 aaPredicted RBP9.18□□□□□ -0.94
KPNA1-206ENST00000476916 FAM43AQ8N2R8 423 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 TAB3Q8N5C8 712 aaPredicted RBP9.18□□□□□ -0.94
KPNA1-206ENST00000476916 ZSCAN1Q8NBB4 408 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 ATL2Q8NHH9 583 aa9.18□□□□□ -0.94
KPNA1-206ENST00000476916 GAL3ST3Q96A11 431 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms