RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ZBTB43O43298 467 aa18.67■□□□□ 0.58
COL1A1-205ENST00000476387 EPB41L2O43491 1005 aaKnown RBP18.67■□□□□ 0.58
COL1A1-205ENST00000476387 HOXA13P31271 388 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-205ENST00000476387 PGM5Q15124 567 aa18.67■□□□□ 0.58
COL1A1-205ENST00000476387 TMTC3Q6ZXV5 915 aa18.67■□□□□ 0.58
COL1A1-205ENST00000476387 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
COL1A1-205ENST00000476387 RETREG2Q8NC44 543 aa18.67■□□□□ 0.58
COL1A1-205ENST00000476387 KAT2BQ92831 832 aa18.67■□□□□ 0.58
COL1A1-205ENST00000476387 RBM28Q9NW13 759 aaKnown RBP18.67■□□□□ 0.58
COL1A1-205ENST00000476387 NAP1L2Q9ULW6 460 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-205ENST00000476387 NOD1Q9Y239 953 aa18.67■□□□□ 0.58
COL1A1-205ENST00000476387 SLC4A7Q9Y6M7 1214 aa18.67■□□□□ 0.58
COL1A1-205ENST00000476387 KLF18A0A0U1RQI7 1052 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 RGS20O76081 388 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 TGFB3P10600 412 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 HOXD8P13378 290 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-205ENST00000476387 PSMA5P28066 241 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 RTN1Q16799 776 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 DHX37Q8IY37 1157 aaKnown RBP18.66■□□□□ 0.58
COL1A1-205ENST00000476387 CMTR1Q8N1G2 835 aaKnown RBP18.66■□□□□ 0.58
COL1A1-205ENST00000476387 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 CAGE1Q8TC20 777 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 KATNAL1Q9BW62 490 aa18.66■□□□□ 0.58
COL1A1-205ENST00000476387 GOLGA8AA7E2F4 631 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 GOLGA8BA8MQT2 603 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 IQCF3P0C7M6 154 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 MYCLP12524 364 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-205ENST00000476387 ACTN1P12814 892 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 CPA1P15085 419 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 CCND2P30279 289 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 PTGISQ16647 500 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 PPP1R13LQ8WUF5 828 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 CUL5Q93034 780 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 FRMPD4Q14CM0 1322 aa18.65■□□□□ 0.58
COL1A1-205ENST00000476387 ZBBXA8MT70 800 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 PPFIA4O75335 1185 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 F2P00734 622 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.57
COL1A1-205ENST00000476387 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 RBL2Q08999 1139 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 CELF3Q5SZQ8 465 aaKnown RBP18.64■□□□□ 0.57
COL1A1-205ENST00000476387 MYSM1Q5VVJ2 828 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 GDF6Q6KF10 455 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-205ENST00000476387 DEFB128Q7Z7B8 93 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 IL31RAQ8NI17 732 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 AFAP1L1Q8TED9 768 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 CTAGE1Q96RT6 745 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 GAS2L1Q99501 681 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-205ENST00000476387 SLC28A3Q9HAS3 691 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 GTF2IRD1Q9UHL9 959 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 BRPF3Q9ULD4 1205 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 TANC1Q9C0D5 1861 aa18.64■□□□□ 0.57
COL1A1-205ENST00000476387 HAS3O00219 553 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 STAM2O75886 525 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 RPS6KB1P23443 525 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 PSEN2P49810 448 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 RCAN1P53805 252 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 Q6ZUG5 572 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 C7orf31Q8N865 590 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 SMARCC2Q8TAQ2 1214 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 NKX2-4Q9H2Z4 354 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 YBX2Q9Y2T7 364 aaKnown RBP18.63■□□□□ 0.57
COL1A1-205ENST00000476387 CNTNAP5Q8WYK1 1306 aa18.63■□□□□ 0.57
COL1A1-205ENST00000476387 SCN5AQ14524 2016 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 CHD7Q9P2D1 2997 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 PARNO95453 639 aaKnown RBP18.62■□□□□ 0.57
COL1A1-205ENST00000476387 GGPS1O95749 300 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 UBA1P22314 1058 aaKnown RBP18.62■□□□□ 0.57
COL1A1-205ENST00000476387 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
COL1A1-205ENST00000476387 APOBRQ0VD83 1088 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 MFSD10Q14728 455 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 GNPTABQ3T906 1256 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 HEATR3Q7Z4Q2 680 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 PHOSPHO2Q8TCD6 241 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 BRF1Q92994 677 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 SPATA33Q96N06 139 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 PRDM12Q9H4Q4 367 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 HDAC6Q9UBN7 1215 aa18.62■□□□□ 0.57
COL1A1-205ENST00000476387 PIK3CDO00329 1044 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 BAIAP3O94812 1187 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 ZNF286BP0CG31 522 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 SELPP16109 830 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 RABGGTBP53611 331 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 KIAA0753Q2KHM9 967 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 HSDL1Q3SXM5 330 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 DHX38Q92620 1227 aaKnown RBP18.61■□□□□ 0.57
COL1A1-205ENST00000476387 INPP4AQ96PE3 977 aaPredicted RBP18.61■□□□□ 0.57
COL1A1-205ENST00000476387 SLC9A7Q96T83 725 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 ALG1Q9BT22 464 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 USP26Q9BXU7 913 aa18.61■□□□□ 0.57
COL1A1-205ENST00000476387 FTOQ9C0B1 505 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL1A1-205ENST00000476387 GBF1Q92538 1859 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 TTC28Q96AY4 2481 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 CCDC196A0A1B0GTZ2 297 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 ICAM3P32942 547 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 SP2Q02086 613 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms