RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TNFAIP2Q03169 654 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 PKP1Q13835 747 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 PPP4R3AQ6IN85 833 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 KCNV1Q6PIU1 500 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 BRAPQ7Z569 592 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 PLA2G4DQ86XP0 818 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 CDHR1Q96JP9 859 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 DAXXQ9UER7 740 aaPredicted RBP25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 DDX20Q9UHI6 824 aaKnown RBP25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 DDX41Q9UJV9 622 aaKnown RBP25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 MYH15Q9Y2K3 1946 aa25.2■■□□□ 1.62
MCF2L2-209ENST00000475664 MAFGO15525 162 aa25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 TXNP10599 105 aaKnown RBP25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 TGFB3P10600 412 aa25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 DDIT3P35638 169 aa25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 SETQ01105 290 aaPredicted RBP25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 DUSP28Q4G0W2 176 aa25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 PRR16Q569H4 304 aa25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 LENG1Q96BZ8 264 aaPredicted RBP25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 NAP1L4Q99733 375 aaKnown RBP25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 RNF208Q9H0X6 261 aa25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 KCNH7Q9NS40 1196 aa25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 NOL7Q9UMY1 257 aaKnown RBP25.19■■□□□ 1.62
MCF2L2-209ENST00000475664 MSCO60682 206 aa25.18■■□□□ 1.62
MCF2L2-209ENST00000475664 ZSCAN22P10073 491 aaPredicted RBP25.18■■□□□ 1.62
MCF2L2-209ENST00000475664 ARP10275 920 aa25.18■■□□□ 1.62
MCF2L2-209ENST00000475664 TOB1P50616 345 aaPredicted RBP25.18■■□□□ 1.62
MCF2L2-209ENST00000475664 Q4G0T1 1027 aa25.18■■□□□ 1.62
MCF2L2-209ENST00000475664 GNEQ9Y223 722 aaKnown RBP25.18■■□□□ 1.62
MCF2L2-209ENST00000475664 SLC37A4O43826 429 aa25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 CCNT1O60563 726 aaKnown RBP25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 DUSP11O75319 330 aaKnown RBP25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 UBA1P22314 1058 aaKnown RBP25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 SP2Q02086 613 aa25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 LY6KQ17RY6 165 aa25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 GJC2Q5T442 439 aaPredicted RBP25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 ANO1Q5XXA6 986 aa25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 LHX8Q68G74 356 aa25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 AGO4Q9HCK5 861 aaKnown RBP25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 DDX25Q9UHL0 483 aaKnown RBP25.17■■□□□ 1.62
MCF2L2-209ENST00000475664 NKRFO15226 690 aaKnown RBP eCLIP25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 ATP9AO75110 1047 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 RARBP10826 455 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 KCNA2P16389 499 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 ATP2B1P20020 1258 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 PTGS1P23219 599 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 RILPL1Q5EBL4 403 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 TTC38Q5R3I4 469 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 MYSM1Q5VVJ2 828 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 COPS5Q92905 334 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 SENP7Q9BQF6 1050 aa25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 ZSCAN16Q9H4T2 348 aaPredicted RBP25.16■■□□□ 1.62
MCF2L2-209ENST00000475664 BRD1O95696 1058 aa25.15■■□□□ 1.62
MCF2L2-209ENST00000475664 DEFB118Q96PH6 123 aa25.15■■□□□ 1.62
MCF2L2-209ENST00000475664 ZDHHC9Q9Y397 364 aa25.15■■□□□ 1.62
MCF2L2-209ENST00000475664 Q9Y3F1 56 aa25.15■■□□□ 1.62
MCF2L2-209ENST00000475664 MSH4O15457 936 aa25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 F13A1P00488 732 aa25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 GJB1P08034 283 aa25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 ARHGAP1Q07960 439 aa25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 ORC2Q13416 577 aaPredicted RBP25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 NBR1Q14596 966 aa25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 FOXD4L5Q5VV16 416 aaPredicted RBP25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 FOXD4L4Q8WXT5 416 aaPredicted RBP25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 UPF3AQ9H1J1 476 aaKnown RBP25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 PKD2L1Q9P0L9 805 aa25.14■■□□□ 1.62
MCF2L2-209ENST00000475664 SYNRGQ9UMZ2 1314 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 POTEFA5A3E0 1075 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 GGPS1O95749 300 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 GH1P01241 217 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 MCM7P33993 719 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 ITGB3BPQ13352 177 aaPredicted RBP25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 NEDD9Q14511 834 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 CELF3Q5SZQ8 465 aaKnown RBP25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 TLK2Q86UE8 772 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 POTEDQ86YR6 584 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 ETNPPLQ8TBG4 499 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 EMID1Q96A84 441 aaPredicted RBP25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 IPO9Q96P70 1041 aaKnown RBP25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 ZNF577Q9BSK1 485 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 BCAS3Q9H6U6 928 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 KCNMB3Q9NPA1 279 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 XPNPEP3Q9NQH7 507 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 PCDHB6Q9Y5E3 794 aa25.13■■□□□ 1.61
MCF2L2-209ENST00000475664 IPO5O00410 1097 aaKnown RBP25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 NEMFO60524 1076 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 GJA9P57773 515 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 NKX3-2P78367 333 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 ZNF174Q15697 407 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 FAM173BQ6P4H8 233 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 GIMAP8Q8ND71 665 aaPredicted RBP25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 OR6J1Q8NGC5 347 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 SLC5A5Q92911 643 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 ABHD8Q96I13 439 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 CRISPLD2Q9H0B8 497 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 NFASCO94856 1347 aa25.12■■□□□ 1.61
MCF2L2-209ENST00000475664 CTAGE5O15320 804 aa25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 DHX15O43143 795 aaKnown RBP25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 DYNC1LI2O43237 492 aaPredicted RBP25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 ADAMTS4O75173 837 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms