RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ARRDC4Q8NCT1 418 aa7.23□□□□□ -1.25
LTN1-204ENST00000475344 SPATA6Q9NWH7 488 aaPredicted RBP7.23□□□□□ -1.25
LTN1-204ENST00000475344 RTEL1Q9NZ71 1219 aa7.23□□□□□ -1.25
LTN1-204ENST00000475344 PCDHB4Q9Y5E5 795 aa7.23□□□□□ -1.25
LTN1-204ENST00000475344 NPFFR2Q9Y5X5 522 aa7.23□□□□□ -1.25
LTN1-204ENST00000475344 SH3D21A4FU49 640 aa7.22□□□□□ -1.25
LTN1-204ENST00000475344 PABPC1P11940 636 aaKnown RBP7.22□□□□□ -1.25
LTN1-204ENST00000475344 SARSP49591 514 aaKnown RBP7.22□□□□□ -1.25
LTN1-204ENST00000475344 IFRD2Q12894 506 aaPredicted RBP7.22□□□□□ -1.25
LTN1-204ENST00000475344 SPATC1Q76KD6 591 aa7.22□□□□□ -1.25
LTN1-204ENST00000475344 C11orf84Q9BUA3 381 aaPredicted RBP7.22□□□□□ -1.25
LTN1-204ENST00000475344 GPR27Q9NS67 375 aa7.22□□□□□ -1.25
LTN1-204ENST00000475344 PFDN2Q9UHV9 154 aa7.22□□□□□ -1.25
LTN1-204ENST00000475344 ZNF652Q9Y2D9 606 aa7.22□□□□□ -1.25
LTN1-204ENST00000475344 PRRG2O14669 202 aa7.21□□□□□ -1.26
LTN1-204ENST00000475344 SYN1P17600 705 aa7.21□□□□□ -1.26
LTN1-204ENST00000475344 NKX3-2P78367 333 aa7.21□□□□□ -1.26
LTN1-204ENST00000475344 MTERF2Q49AM1 385 aa7.21□□□□□ -1.26
LTN1-204ENST00000475344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.21□□□□□ -1.26
LTN1-204ENST00000475344 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
LTN1-204ENST00000475344 MYOTQ9UBF9 498 aa7.21□□□□□ -1.26
LTN1-204ENST00000475344 NCANO14594 1321 aa7.21□□□□□ -1.26
LTN1-204ENST00000475344 TCRBV5S2A0A599 114 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 KRIT1O00522 736 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 PDPK1O15530 556 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 FGFR1P11362 822 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 ITGA1P56199 1179 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 LINC00482Q8N8I6 264 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 KYQ8NBH2 561 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 DCAF4Q8WV16 495 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 DDX1Q92499 740 aaKnown RBP7.2□□□□□ -1.26
LTN1-204ENST00000475344 OSBP2Q969R2 916 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 TOE1Q96GM8 510 aaKnown RBP7.2□□□□□ -1.26
LTN1-204ENST00000475344 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 KCNJ15Q99712 375 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 SPATA9Q9BWV2 254 aa7.2□□□□□ -1.26
LTN1-204ENST00000475344 SLC27A2O14975 620 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 MAFKO60675 156 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 THBS2P35442 1172 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 BUD31P41223 144 aaPredicted RBP7.19□□□□□ -1.26
LTN1-204ENST00000475344 GJA9P57773 515 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 SSRP1Q08945 709 aaKnown RBP7.19□□□□□ -1.26
LTN1-204ENST00000475344 NTRK3Q16288 839 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 FRMD5Q7Z6J6 570 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 FERMT3Q86UX7 667 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 CDC6Q99741 560 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 PCDH18Q9HCL0 1135 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 NGRNQ9NPE2 291 aaKnown RBP7.19□□□□□ -1.26
LTN1-204ENST00000475344 DTLQ9NZJ0 730 aa7.19□□□□□ -1.26
LTN1-204ENST00000475344 TADA3O75528 432 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 COL6A2P12110 1019 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 GRK2P25098 689 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 GRK3P35626 688 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 GRIN1Q05586 938 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 RTP5Q14D33 572 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 EMC4Q5J8M3 183 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 UBXN11Q5T124 520 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 ERICH6BQ5W0A0 696 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 RSPO2Q6UXX9 243 aaPredicted RBP7.18□□□□□ -1.26
LTN1-204ENST00000475344 ZNF761Q86XN6 746 aaPredicted RBP7.18□□□□□ -1.26
LTN1-204ENST00000475344 RBM12BQ8IXT5 1001 aaKnown RBP7.18□□□□□ -1.26
LTN1-204ENST00000475344 ADAMTS17Q8TE56 1095 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 TEPSINQ96N21 525 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 BDH2Q9BUT1 245 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 CDIP1Q9H305 208 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 MSRB2Q9Y3D2 182 aa7.18□□□□□ -1.26
LTN1-204ENST00000475344 PRICKLE3O43900 615 aaPredicted RBP7.17□□□□□ -1.26
LTN1-204ENST00000475344 GNAT1P11488 350 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 KIZQ2M2Z5 673 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 PRAMEF18Q5VWM3 479 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 MCTP2Q6DN12 878 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 LBX2Q6XYB7 198 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 IFNL3Q8IZI9 196 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 TTLL6Q8N841 843 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 IPO9Q96P70 1041 aaKnown RBP7.17□□□□□ -1.26
LTN1-204ENST00000475344 SMOC1Q9H4F8 434 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 SLC6A20Q9NP91 592 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 CROTQ9UKG9 612 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 TRAF6Q9Y4K3 522 aa7.17□□□□□ -1.26
LTN1-204ENST00000475344 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.26
LTN1-204ENST00000475344 RPL13P26373 211 aaKnown RBP7.16□□□□□ -1.26
LTN1-204ENST00000475344 CNR2P34972 360 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 GPR85P60893 370 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 RASGRF1Q13972 1273 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 RGL3Q3MIN7 710 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 TEPPQ6URK8 271 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 TMC5Q6UXY8 1006 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 CXorf38Q8TB03 319 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 PHOSPHO1Q8TCT1 267 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 C8orf37Q96NL8 207 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 ASH2LQ9UBL3 628 aa7.16□□□□□ -1.26
LTN1-204ENST00000475344 NOBOXO60393 691 aa7.15□□□□□ -1.26
LTN1-204ENST00000475344 DIAPH1O60610 1272 aaKnown RBP7.15□□□□□ -1.26
LTN1-204ENST00000475344 LRG1P02750 347 aa7.15□□□□□ -1.26
LTN1-204ENST00000475344 SOD2P04179 222 aa7.15□□□□□ -1.26
LTN1-204ENST00000475344 CELA3BP08861 270 aa7.15□□□□□ -1.26
LTN1-204ENST00000475344 PLP2Q04941 152 aa7.15□□□□□ -1.26
LTN1-204ENST00000475344 SPIRE1Q08AE8 756 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms