RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PPM1EQ8WY54 764 aa17.43■□□□□ 0.38
VARS-223ENST00000474643 EMID1Q96A84 441 aaPredicted RBP17.43■□□□□ 0.38
VARS-223ENST00000474643 NKX2-4Q9H2Z4 354 aa17.43■□□□□ 0.38
VARS-223ENST00000474643 LY9Q9HBG7 655 aa17.43■□□□□ 0.38
VARS-223ENST00000474643 BAZ2BQ9UIF8 2168 aaKnown RBP17.42■□□□□ 0.38
VARS-223ENST00000474643 OPLAHO14841 1288 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 EPB41L2O43491 1005 aaKnown RBP17.42■□□□□ 0.38
VARS-223ENST00000474643 IGFBP4P22692 258 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 KCNJ6P48051 423 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 MFSD10Q14728 455 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 ADCK5Q3MIX3 580 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 BLOC1S2Q6QNY1 142 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 PRDM12Q9H4Q4 367 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 NAP1L2Q9ULW6 460 aaPredicted RBP17.42■□□□□ 0.38
VARS-223ENST00000474643 SNX14Q9Y5W7 946 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 SLC12A7Q9Y666 1083 aa17.42■□□□□ 0.38
VARS-223ENST00000474643 SCN10AQ9Y5Y9 1956 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 CYTH3O43739 400 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 IQCF3P0C7M6 154 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 TGFB3P10600 412 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 PSMA5P28066 241 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 LIFRP42702 1097 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 RABGGTBP53611 331 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 GHRHRQ02643 423 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 KIAA0753Q2KHM9 967 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 CELF3Q5SZQ8 465 aaKnown RBP17.41■□□□□ 0.38
VARS-223ENST00000474643 VSIG10LQ86VR7 867 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 USP26Q9BXU7 913 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 KIAA1217Q5T5P2 1943 aa17.41■□□□□ 0.38
VARS-223ENST00000474643 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
VARS-223ENST00000474643 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
VARS-223ENST00000474643 STAM2O75886 525 aa17.4■□□□□ 0.38
VARS-223ENST00000474643 GDF6Q6KF10 455 aaPredicted RBP17.4■□□□□ 0.38
VARS-223ENST00000474643 IL31RAQ8NI17 732 aa17.4■□□□□ 0.38
VARS-223ENST00000474643 ZFP91Q96JP5 570 aaPredicted RBP17.4■□□□□ 0.38
VARS-223ENST00000474643 SLC9A7Q96T83 725 aa17.4■□□□□ 0.38
VARS-223ENST00000474643 GTF2IRD1Q9UHL9 959 aa17.4■□□□□ 0.38
VARS-223ENST00000474643 PCDHA11Q9Y5I1 949 aa17.4■□□□□ 0.38
VARS-223ENST00000474643 PPFIA4O75335 1185 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 PARNO95453 639 aaKnown RBP17.39■□□□□ 0.37
VARS-223ENST00000474643 F2P00734 622 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 SELPP16109 830 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 RXRAP19793 462 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 UBA1P22314 1058 aaKnown RBP17.39■□□□□ 0.37
VARS-223ENST00000474643 COL9A3Q14050 684 aaPredicted RBP17.39■□□□□ 0.37
VARS-223ENST00000474643 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 LRRC8DQ7L1W4 858 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 SESTD1Q86VW0 696 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 MICU3Q86XE3 530 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 RAB11FIP4Q86YS3 637 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 KCNB2Q92953 911 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 ZBED2Q9BTP6 218 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 HDAC6Q9UBN7 1215 aa17.39■□□□□ 0.37
VARS-223ENST00000474643 CPA1P15085 419 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 EXOSC10Q01780 885 aaKnown RBP17.38■□□□□ 0.37
VARS-223ENST00000474643 NEDD9Q14511 834 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 NLRX1Q86UT6 975 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 MICALL1Q8N3F8 863 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 CCDC82Q8N4S0 544 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 KAT2BQ92831 832 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 EHMT1Q9H9B1 1298 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 RTEL1Q9NZ71 1219 aa17.38■□□□□ 0.37
VARS-223ENST00000474643 YBX2Q9Y2T7 364 aaKnown RBP17.38■□□□□ 0.37
VARS-223ENST00000474643 SPDYE3A6NKU9 549 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 FIBPO43427 364 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 BAIAP3O94812 1187 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 SP4Q02446 784 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 SLC35G1Q2M3R5 365 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 HSDL1Q3SXM5 330 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 Q6ZUG5 572 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 HEATR3Q7Z4Q2 680 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
VARS-223ENST00000474643 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
VARS-223ENST00000474643 TANC1Q9C0D5 1861 aa17.37■□□□□ 0.37
VARS-223ENST00000474643 KLF18A0A0U1RQI7 1052 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 RGS20O76081 388 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 SMARCA1P28370 1054 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 PTK7Q13308 1070 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 CCDC85BQ15834 202 aaPredicted RBP17.36■□□□□ 0.37
VARS-223ENST00000474643 USP17L6PQ6QN14 398 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 CYFIP1Q7L576 1253 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 SGMS1Q86VZ5 419 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 CMTR1Q8N1G2 835 aaKnown RBP17.36■□□□□ 0.37
VARS-223ENST00000474643 PHOSPHO2Q8TCD6 241 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 SYMPKQ92797 1274 aaKnown RBP17.36■□□□□ 0.37
VARS-223ENST00000474643 PSTPIP2Q9H939 334 aa17.36■□□□□ 0.37
VARS-223ENST00000474643 C17orf102A2RUQ5 167 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 H3BRB1 525 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 ZBTB43O43298 467 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 GTPBP6O43824 516 aaPredicted RBP17.35■□□□□ 0.37
VARS-223ENST00000474643 TLL1O43897 1013 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 CA3P07451 260 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 GNAT1P11488 350 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms