RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 RPUSD2Q8IZ73 545 aaKnown RBP17.97■□□□□ 0.47
CLIC3-201ENST00000473911 CMTR1Q8N1G2 835 aaKnown RBP17.97■□□□□ 0.47
CLIC3-201ENST00000473911 SRBD1Q8N5C6 995 aaKnown RBP17.97■□□□□ 0.47
CLIC3-201ENST00000473911 PPTC7Q8NI37 304 aa17.97■□□□□ 0.47
CLIC3-201ENST00000473911 SMARCC2Q8TAQ2 1214 aa17.97■□□□□ 0.47
CLIC3-201ENST00000473911 EMID1Q96A84 441 aaPredicted RBP17.97■□□□□ 0.47
CLIC3-201ENST00000473911 ZFP91Q96JP5 570 aaPredicted RBP17.97■□□□□ 0.47
CLIC3-201ENST00000473911 RGS20O76081 388 aa17.96■□□□□ 0.47
CLIC3-201ENST00000473911 CCDC82Q8N4S0 544 aa17.96■□□□□ 0.47
CLIC3-201ENST00000473911 RETREG2Q8NC44 543 aa17.96■□□□□ 0.47
CLIC3-201ENST00000473911 SPATA33Q96N06 139 aa17.96■□□□□ 0.47
CLIC3-201ENST00000473911 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
CLIC3-201ENST00000473911 GGPS1O95749 300 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 TGFB3P10600 412 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 IGFBP4P22692 258 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 KRT32Q14532 448 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 PTGISQ16647 500 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 GNPTABQ3T906 1256 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 CELF3Q5SZQ8 465 aaKnown RBP17.95■□□□□ 0.46
CLIC3-201ENST00000473911 SGMS1Q86VZ5 419 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 C7orf31Q8N865 590 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 KATNAL1Q9BW62 490 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 MLXIPQ9HAP2 919 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 MSRAQ9UJ68 235 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 NCOR1O75376 2440 aa17.95■□□□□ 0.46
CLIC3-201ENST00000473911 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 STAM2O75886 525 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 NEFLP07196 543 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 COL9A1P20849 921 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 UBA1P22314 1058 aaKnown RBP17.94■□□□□ 0.46
CLIC3-201ENST00000473911 PSEN2P49810 448 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 BFSP2Q13515 415 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 MYSM1Q5VVJ2 828 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 USP17L6PQ6QN14 398 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 DHX32Q7L7V1 743 aaKnown RBP17.94■□□□□ 0.46
CLIC3-201ENST00000473911 CCDC155Q8N6L0 562 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 KAT2BQ92831 832 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 TCEANC2Q96MN5 208 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 ALG1Q9BT22 464 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 RAPGEFL1Q9UHV5 662 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 MYH6P13533 1939 aa17.94■□□□□ 0.46
CLIC3-201ENST00000473911 ZBBXA8MT70 800 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 TNFRSF10AO00220 468 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 PFKMP08237 780 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 MFSD10Q14728 455 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 RAB30Q15771 203 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 GDF6Q6KF10 455 aaPredicted RBP17.93■□□□□ 0.46
CLIC3-201ENST00000473911 HEATR3Q7Z4Q2 680 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 DEFB128Q7Z7B8 93 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 RASEFQ8IZ41 740 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
CLIC3-201ENST00000473911 PSTPIP2Q9H939 334 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 RBM28Q9NW13 759 aaKnown RBP17.93■□□□□ 0.46
CLIC3-201ENST00000473911 RTEL1Q9NZ71 1219 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 TET1Q8NFU7 2136 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 TCF20Q9UGU0 1960 aaKnown RBP17.93■□□□□ 0.46
CLIC3-201ENST00000473911 FRMPD4Q14CM0 1322 aa17.93■□□□□ 0.46
CLIC3-201ENST00000473911 SCN10AQ9Y5Y9 1956 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 RFXAPO00287 272 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 PIK3CDO00329 1044 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 PITPNM1O00562 1244 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 PPFIA4O75335 1185 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 F2P00734 622 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 HMGB1P09429 215 aaKnown RBP17.92■□□□□ 0.46
CLIC3-201ENST00000473911 RFC2P35250 354 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 MRPS9P82933 396 aaKnown RBP17.92■□□□□ 0.46
CLIC3-201ENST00000473911 FGD1P98174 961 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 EXOSC10Q01780 885 aaKnown RBP17.92■□□□□ 0.46
CLIC3-201ENST00000473911 SP2Q02086 613 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 KIAA0753Q2KHM9 967 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 HSDL1Q3SXM5 330 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 TSGA10IPQ3SY00 556 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 SESTD1Q86VW0 696 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 ASB2Q96Q27 587 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 SLC28A3Q9HAS3 691 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 HDAC6Q9UBN7 1215 aa17.92■□□□□ 0.46
CLIC3-201ENST00000473911 NAP1L2Q9ULW6 460 aaPredicted RBP17.92■□□□□ 0.46
CLIC3-201ENST00000473911 PRRC2BQ5JSZ5 2229 aaKnown RBP17.91■□□□□ 0.46
CLIC3-201ENST00000473911 NOP56O00567 594 aaKnown RBP17.91■□□□□ 0.46
CLIC3-201ENST00000473911 MEIS2O14770 477 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 ZBTB43O43298 467 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 FIBPO43427 364 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 ARHGEF15O94989 841 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 RTN1Q16799 776 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 PCNX4Q63HM2 1172 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 XRRA1Q6P2D8 792 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 INPP4AQ96PE3 977 aaPredicted RBP17.91■□□□□ 0.46
CLIC3-201ENST00000473911 FTOQ9C0B1 505 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLIC3-201ENST00000473911 THEGQ9P2T0 379 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 GTF2IRD1Q9UHL9 959 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 SLC4A7Q9Y6M7 1214 aa17.91■□□□□ 0.46
CLIC3-201ENST00000473911 BAZ2BQ9UIF8 2168 aaKnown RBP17.9■□□□□ 0.46
CLIC3-201ENST00000473911 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
CLIC3-201ENST00000473911 EPOPA6NHQ4 379 aa17.9■□□□□ 0.46
CLIC3-201ENST00000473911 GOLGA8AA7E2F4 631 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms