RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 FSD1Q9BTV5 496 aa7.34□□□□□ -1.23
CFHR1-204ENST00000472961 CPVLQ9H3G5 476 aa7.34□□□□□ -1.23
CFHR1-204ENST00000472961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.34□□□□□ -1.23
CFHR1-204ENST00000472961 SUPT16HQ9Y5B9 1047 aaKnown RBP7.34□□□□□ -1.23
CFHR1-204ENST00000472961 NBEAQ8NFP9 2946 aa7.34□□□□□ -1.24
CFHR1-204ENST00000472961 OTOGLQ3ZCN5 2332 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 C5orf67F2Z3F1 127 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 UPP2O95045 317 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 F2P00734 622 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 TXNP10599 105 aaKnown RBP7.33□□□□□ -1.24
CFHR1-204ENST00000472961 HOXD8P13378 290 aaPredicted RBP7.33□□□□□ -1.24
CFHR1-204ENST00000472961 CALML3P27482 149 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 PSEN2P49810 448 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 RRP1P56182 461 aaKnown RBP7.33□□□□□ -1.24
CFHR1-204ENST00000472961 TFAP4Q01664 338 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 IKBKEQ14164 716 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 TSHZ3Q63HK5 1081 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 RCSD1Q6JBY9 416 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 BTNL9Q6UXG8 535 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 FAM160B2Q86V87 743 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 TMEM105Q8N8V8 129 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 SMRP1Q8NCR6 262 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 SCFD2Q8WU76 684 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 LINC01599Q8WXQ3 324 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 ALG1Q9BT22 464 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 BCL11AQ9H165 835 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 MKNK2Q9HBH9 465 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 SYNPO2Q9UMS6 1093 aa7.33□□□□□ -1.24
CFHR1-204ENST00000472961 DOCK8Q8NF50 2099 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 DOCK6Q96HP0 2047 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 PTPDC1A2A3K4 754 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 GPAA1O43292 621 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 SMARCA5O60264 1052 aaPredicted RBP7.32□□□□□ -1.24
CFHR1-204ENST00000472961 SORBS3O60504 671 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 FDX1P10109 184 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 NBL1P41271 181 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 SLC1A4P43007 532 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 FOXK2Q01167 660 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 SP2Q02086 613 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 PTK7Q13308 1070 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 ZKSCAN2Q63HK3 967 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 CHST3Q7LGC8 479 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 SERINC5Q86VE9 423 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 CRIPAKQ8N1N5 446 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 PANK1Q8TE04 598 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 ATOH1Q92858 354 aaPredicted RBP7.32□□□□□ -1.24
CFHR1-204ENST00000472961 GPKOWQ92917 476 aaPredicted RBP eCLIP7.32□□□□□ -1.24
CFHR1-204ENST00000472961 IGFLR1Q9H665 355 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 GPHNQ9NQX3 736 aaPredicted RBP7.32□□□□□ -1.24
CFHR1-204ENST00000472961 CD207Q9UJ71 328 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 DDX41Q9UJV9 622 aaKnown RBP7.32□□□□□ -1.24
CFHR1-204ENST00000472961 BARX2Q9UMQ3 279 aaPredicted RBP7.32□□□□□ -1.24
CFHR1-204ENST00000472961 MTMR7Q9Y216 660 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 NOD1Q9Y239 953 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 CTDP1Q9Y5B0 961 aaPredicted RBP7.32□□□□□ -1.24
CFHR1-204ENST00000472961 CHD8Q9HCK8 2581 aa7.32□□□□□ -1.24
CFHR1-204ENST00000472961 FRMPD2Q68DX3 1309 aaPredicted RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 MIA3Q5JRA6 1907 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 SPTBN2O15020 2390 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 TPRP12270 2363 aaKnown RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 LOC102724159A0A0B4J2E5 919 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 OPLAHO14841 1288 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 NKRFO15226 690 aaKnown RBP eCLIP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 TREHO43280 583 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 KPNA6O60684 536 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 MMP1P03956 469 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 CTNNB1P35222 781 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 CTDSPL2Q05D32 466 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 PDE4DQ08499 809 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 SIGLEC14Q08ET2 396 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 MFSD10Q14728 455 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 PWP2Q15269 919 aaKnown RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 PTPROQ16827 1216 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 KIAA0753Q2KHM9 967 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 HSDL1Q3SXM5 330 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 RNF207Q6ZRF8 634 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 SEPT14Q6ZU15 432 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 FRMD5Q7Z6J6 570 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 ITPRIPQ8IWB1 547 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 IFNL3Q8IZI9 196 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 CHURC1Q8WUH1 139 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 SUSD6Q92537 303 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 CLP1Q92989 425 aaKnown RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 ZNF689Q96CS4 500 aaPredicted RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 KIF1BPQ96EK5 621 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 TAAR1Q96RJ0 339 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 C16orf70Q9BSU1 422 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 UPF3BQ9BZI7 483 aaKnown RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 ADD3Q9UEY8 706 aaKnown RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 TRPC6Q9Y210 931 aa7.31□□□□□ -1.24
CFHR1-204ENST00000472961 USP15Q9Y4E8 981 aaPredicted RBP7.31□□□□□ -1.24
CFHR1-204ENST00000472961 ACACBO00763 2458 aa7.3□□□□□ -1.24
CFHR1-204ENST00000472961 CACNA1IQ9P0X4 2223 aa7.3□□□□□ -1.24
CFHR1-204ENST00000472961 IPO8O15397 1037 aaKnown RBP7.3□□□□□ -1.24
CFHR1-204ENST00000472961 GALR2O43603 387 aaPredicted RBP7.3□□□□□ -1.24
CFHR1-204ENST00000472961 AMHP03971 560 aa7.3□□□□□ -1.24
CFHR1-204ENST00000472961 ITGB1P05556 798 aa7.3□□□□□ -1.24
CFHR1-204ENST00000472961 CTSHP09668 335 aa7.3□□□□□ -1.24
CFHR1-204ENST00000472961 TSPY3P0CV98 308 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms