RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 IL31RAQ8NI17 732 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 PPP1R13LQ8WUF5 828 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 CUL5Q93034 780 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 TMEM87BQ96K49 555 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 MYL10Q9BUA6 226 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 TTC28Q96AY4 2481 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 SCN5AQ14524 2016 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 MYH7BA7E2Y1 1941 aa10.31□□□□□ -0.76
CHEK2-223ENST00000472807 MUC3AQ02505 3323 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 GBF1Q92538 1859 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 STAM2O75886 525 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 RGS20O76081 388 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 GGPS1O95749 300 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 F2P00734 622 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 ZNF286BP0CG31 522 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 TGFB3P10600 412 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 ATP2A2P16615 1042 aaKnown RBP10.3□□□□□ -0.76
CHEK2-223ENST00000472807 UBA1P22314 1058 aaKnown RBP10.3□□□□□ -0.76
CHEK2-223ENST00000472807 SMARCA1P28370 1054 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 PSEN2P49810 448 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 MFSD10Q14728 455 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 GNPTABQ3T906 1256 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 CELF3Q5SZQ8 465 aaKnown RBP10.3□□□□□ -0.76
CHEK2-223ENST00000472807 RNF20Q5VTR2 975 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 SMARCC2Q8TAQ2 1214 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 CAGE1Q8TC20 777 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 KAT2BQ92831 832 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 SPATA33Q96N06 139 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 GAS2L1Q99501 681 aaPredicted RBP10.3□□□□□ -0.76
CHEK2-223ENST00000472807 GTF2IRD1Q9UHL9 959 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 SLC12A7Q9Y666 1083 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 XIRP2A4UGR9 3374 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 FRMPD4Q14CM0 1322 aa10.3□□□□□ -0.76
CHEK2-223ENST00000472807 TRIP12Q14669 1992 aaPredicted RBP10.29□□□□□ -0.76
CHEK2-223ENST00000472807 NOP56O00567 594 aaKnown RBP10.29□□□□□ -0.76
CHEK2-223ENST00000472807 SORBS3O60504 671 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 IQCF3P0C7M6 154 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 HOXD8P13378 290 aaPredicted RBP10.29□□□□□ -0.76
CHEK2-223ENST00000472807 LIFRP42702 1097 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 KIAA0753Q2KHM9 967 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 GDF6Q6KF10 455 aaPredicted RBP10.29□□□□□ -0.76
CHEK2-223ENST00000472807 AFAP1L1Q8TED9 768 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 ALG1Q9BT22 464 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 FTOQ9C0B1 505 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHEK2-223ENST00000472807 NKX2-4Q9H2Z4 354 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 MLXIPQ9HAP2 919 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 SLC28A3Q9HAS3 691 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 PCDHA11Q9Y5I1 949 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 REV3LO60673 3130 aa10.29□□□□□ -0.76
CHEK2-223ENST00000472807 PPFIA4O75335 1185 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 BAIAP3O94812 1187 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 PLEKHA8P1O95397 391 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 PARNO95453 639 aaKnown RBP10.28□□□□□ -0.76
CHEK2-223ENST00000472807 SELPP16109 830 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 RXRAP19793 462 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 NECTIN1Q15223 517 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 PPP2R2DQ66LE6 453 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 XRRA1Q6P2D8 792 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 SYNE3Q6ZMZ3 975 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 MICU3Q86XE3 530 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 INPP4AQ96PE3 977 aaPredicted RBP10.28□□□□□ -0.76
CHEK2-223ENST00000472807 SLC9A7Q96T83 725 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 LRRC2Q9BYS8 371 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 HDAC6Q9UBN7 1215 aa10.28□□□□□ -0.76
CHEK2-223ENST00000472807 YBX2Q9Y2T7 364 aaKnown RBP10.28□□□□□ -0.76
CHEK2-223ENST00000472807 TET1Q8NFU7 2136 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 HAS3O00219 553 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 FIBPO43427 364 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 CDC45O75419 566 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 ICAM3P32942 547 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 KCNJ6P48051 423 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 RABGGTBP53611 331 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 MRPS9P82933 396 aaKnown RBP10.27□□□□□ -0.77
CHEK2-223ENST00000472807 SP2Q02086 613 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 RBL2Q08999 1139 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 PTK7Q13308 1070 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 NEDD9Q14511 834 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 HSDL1Q3SXM5 330 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 METTL7BQ6UX53 244 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 TMTC3Q6ZXV5 915 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 LRRC8DQ7L1W4 858 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 SKAP1Q86WV1 359 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 RAB11FIP4Q86YS3 637 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 CMTR1Q8N1G2 835 aaKnown RBP10.27□□□□□ -0.77
CHEK2-223ENST00000472807 SRBD1Q8N5C6 995 aaKnown RBP10.27□□□□□ -0.77
CHEK2-223ENST00000472807 GPKOWQ92917 476 aaPredicted RBP eCLIP10.27□□□□□ -0.77
CHEK2-223ENST00000472807 ZFP91Q96JP5 570 aaPredicted RBP10.27□□□□□ -0.77
CHEK2-223ENST00000472807 CTAGE1Q96RT6 745 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 PRDM12Q9H4Q4 367 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 PSTPIP2Q9H939 334 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
CHEK2-223ENST00000472807 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 MEIS2O14770 477 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 LGALS2P05162 132 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 CKBP12277 381 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms