RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 ALAS1P13196 640 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 SNAP25P60880 206 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 NHLH1Q02575 133 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-209ENST00000472608 LEXMQ3ZCV2 418 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 TMEM63BQ5T3F8 832 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 SPRED2Q7Z698 418 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 CPVLQ9H3G5 476 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 UBE2ZQ9H832 354 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-209ENST00000472608 RNF146Q9NTX7 359 aa16.51■□□□□ 0.23
ABCF3-209ENST00000472608 RBM28Q9NW13 759 aaKnown RBP16.51■□□□□ 0.23
ABCF3-209ENST00000472608 SCN5AQ14524 2016 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 ZBTB5O15062 677 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 CYTH3O43739 400 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 ALADP13716 330 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 PURAQ00577 322 aaKnown RBP16.5■□□□□ 0.23
ABCF3-209ENST00000472608 QRICH1Q2TAL8 776 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 RGS22Q8NE09 1264 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 BRF1Q92994 677 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 MYL10Q9BUA6 226 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 VTA1Q9NP79 307 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 POLR3EQ9NVU0 708 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
ABCF3-209ENST00000472608 PNMA6FA0A0J9YX94 578 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 CCDC196A0A1B0GTZ2 297 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 POTEB3A0JP26 581 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 DHX16O60231 1041 aaKnown RBP16.49■□□□□ 0.23
ABCF3-209ENST00000472608 SLC35G1Q2M3R5 365 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 DUSP28Q4G0W2 176 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 POTEBQ6S5H4 581 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 FBXO11Q86XK2 927 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
ABCF3-209ENST00000472608 AMNQ9BXJ7 453 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 VAT1LQ9HCJ6 419 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 NID2Q14112 1375 aa16.49■□□□□ 0.23
ABCF3-209ENST00000472608 ABCB11O95342 1321 aa16.48■□□□□ 0.23
ABCF3-209ENST00000472608 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 TOB2Q14106 344 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
ABCF3-209ENST00000472608 FBXO16Q8IX29 292 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 SRBD1Q8N5C6 995 aaKnown RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 SAMD3Q8N6K7 520 aa16.48■□□□□ 0.23
ABCF3-209ENST00000472608 CLEC4DQ8WXI8 215 aa16.48■□□□□ 0.23
ABCF3-209ENST00000472608 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
ABCF3-209ENST00000472608 MRPL11Q9Y3B7 192 aaKnown RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 DDX49Q9Y6V7 483 aaKnown RBP16.48■□□□□ 0.23
ABCF3-209ENST00000472608 SCN10AQ9Y5Y9 1956 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
ABCF3-209ENST00000472608 RBM47A0AV96 593 aaKnown RBP16.47■□□□□ 0.23
ABCF3-209ENST00000472608 LCHNA4D1U4 455 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-209ENST00000472608 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 ANKRD1Q15327 319 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 RTN1Q16799 776 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 MUM1L1Q5H9M0 696 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 FBXL18Q96ME1 805 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 MTG1Q9BT17 334 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-209ENST00000472608 SUGCTQ9HAC7 445 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 UPF2Q9HAU5 1272 aaKnown RBP16.47■□□□□ 0.23
ABCF3-209ENST00000472608 CYP39A1Q9NYL5 469 aa16.47■□□□□ 0.23
ABCF3-209ENST00000472608 COL4A4P53420 1690 aaPredicted RBP16.46■□□□□ 0.23
ABCF3-209ENST00000472608 ZNF318Q5VUA4 2279 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 GOLGA8BA8MQT2 603 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 PLEKHA8P1O95397 391 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 RXRAP19793 462 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 CPT1AP50416 773 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
ABCF3-209ENST00000472608 ERVK-21P61565 698 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 GHRHRQ02643 423 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
ABCF3-209ENST00000472608 NBPF20Q3BBV1 942 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 EEPD1Q7L9B9 569 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 MCF2L2Q86YR7 1114 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 GDPD5Q8WTR4 605 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 RRP36Q96EU6 259 aaKnown RBP16.46■□□□□ 0.23
ABCF3-209ENST00000472608 PIGSQ96S52 555 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 C22orf23Q9BZE7 217 aa16.46■□□□□ 0.23
ABCF3-209ENST00000472608 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
ABCF3-209ENST00000472608 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
ABCF3-209ENST00000472608 MAP3K20Q9NYL2 800 aaKnown RBP16.46■□□□□ 0.23
ABCF3-209ENST00000472608 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
ABCF3-209ENST00000472608 NFIBO00712 420 aa16.45■□□□□ 0.22
ABCF3-209ENST00000472608 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
ABCF3-209ENST00000472608 WDR5P61964 334 aaKnown RBP16.45■□□□□ 0.22
ABCF3-209ENST00000472608 FUT2Q10981 343 aa16.45■□□□□ 0.22
ABCF3-209ENST00000472608 BFSP2Q13515 415 aa16.45■□□□□ 0.22
ABCF3-209ENST00000472608 GPNMBQ14956 572 aa16.45■□□□□ 0.22
ABCF3-209ENST00000472608 USH1GQ495M9 461 aa16.45■□□□□ 0.22
ABCF3-209ENST00000472608 PCDHA1Q9Y5I3 950 aa16.45■□□□□ 0.22
ABCF3-209ENST00000472608 MYH6P13533 1939 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms