RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 RBM8AQ9Y5S9 174 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-213ENST00000472381 KIF28PB7ZC32 967 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 HAS3O00219 553 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 SORBS3O60504 671 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 HOXD8P13378 290 aaPredicted RBP23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 KCNJ6P48051 423 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 ANTXR2P58335 489 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 RBL2Q08999 1139 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 HERC6Q8IVU3 1022 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 MB21D2Q8IYB1 491 aaPredicted RBP23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 IGDCC4Q8TDY8 1250 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 DHX38Q92620 1227 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 THEGQ9P2T0 379 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 TTC28Q96AY4 2481 aa23.25■■□□□ 1.31
RPUSD3-213ENST00000472381 CKBP12277 381 aa23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 UBA1P22314 1058 aaKnown RBP23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 KIF5BP33176 963 aa23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 PTK7Q13308 1070 aa23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 HSDL1Q3SXM5 330 aa23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 CASC1Q6TDU7 716 aa23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 CTCFLQ8NI51 663 aaPredicted RBP23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 PIBF1Q8WXW3 757 aa23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 MLXIPQ9HAP2 919 aa23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 SPTBN5Q9NRC6 3674 aaKnown RBP23.24■■□□□ 1.31
RPUSD3-213ENST00000472381 DDAH1O94760 285 aa23.23■■□□□ 1.31
RPUSD3-213ENST00000472381 GNPTABQ3T906 1256 aa23.23■■□□□ 1.31
RPUSD3-213ENST00000472381 ZNF654Q8IZM8 581 aa23.23■■□□□ 1.31
RPUSD3-213ENST00000472381 ATXN2LQ8WWM7 1075 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-213ENST00000472381 ZFP91Q96JP5 570 aaPredicted RBP23.23■■□□□ 1.31
RPUSD3-213ENST00000472381 MAP3K14Q99558 947 aa23.23■■□□□ 1.31
RPUSD3-213ENST00000472381 SP2Q02086 613 aa23.22■■□□□ 1.31
RPUSD3-213ENST00000472381 CNKSR3Q6P9H4 555 aa23.22■■□□□ 1.31
RPUSD3-213ENST00000472381 RRP36Q96EU6 259 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-213ENST00000472381 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
RPUSD3-213ENST00000472381 TSPYL2Q9H2G4 693 aaPredicted RBP23.22■■□□□ 1.31
RPUSD3-213ENST00000472381 LY9Q9HBG7 655 aa23.22■■□□□ 1.31
RPUSD3-213ENST00000472381 PRC1O43663 620 aa23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 STAM2O75886 525 aa23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 GPNMBQ14956 572 aa23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 MICALL1Q8N3F8 863 aa23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 GPKOWQ92917 476 aaPredicted RBP eCLIP23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 MTA3Q9BTC8 594 aa23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 MYL10Q9BUA6 226 aa23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 SEC63Q9UGP8 760 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 PTPRSQ13332 1948 aa23.21■■□□□ 1.31
RPUSD3-213ENST00000472381 FRMPD4Q14CM0 1322 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 NOP56O00567 594 aaKnown RBP23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 TLL1O43897 1013 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 CXCL10P02778 98 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 SMARCA1P28370 1054 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 MCM5P33992 734 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 WDR5P61964 334 aaKnown RBP23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 NFXL1Q6ZNB6 911 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 SMARCC2Q8TAQ2 1214 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 CUL5Q93034 780 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 LZTS2Q9BRK4 669 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 CERS4Q9HA82 394 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 TRANK1O15050 2925 aa23.2■■□□□ 1.3
RPUSD3-213ENST00000472381 GTPBP6O43824 516 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 NBNO60934 754 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 GNAQP50148 359 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 MRPS9P82933 396 aaKnown RBP23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 ZNF200P98182 395 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 TAP1Q03518 808 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 NEDD9Q14511 834 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 TMTC2Q8N394 836 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 INPP4AQ96PE3 977 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 ASB2Q96Q27 587 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 C16orf70Q9BSU1 422 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 ZBED2Q9BTP6 218 aa23.19■■□□□ 1.3
RPUSD3-213ENST00000472381 ABHD14A-ACY1A0A1B0GW23 586 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 CCDC69A6NI79 296 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 H3BRB1 525 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 EFCAB14O75071 495 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 ICAM3P32942 547 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 MRPS5P82675 430 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 TRIM71Q2Q1W2 868 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 ZNF618Q5T7W0 954 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 IL27Q8NEV9 243 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 ARNTL2Q8WYA1 636 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 TMEM87BQ96K49 555 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 LSG1Q9H089 658 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 TUT1Q9H6E5 874 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 RTEL1Q9NZ71 1219 aa23.18■■□□□ 1.3
RPUSD3-213ENST00000472381 DOCK5Q9H7D0 1870 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 SPATA31C2B4DYI2 1134 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 RFXAPO00287 272 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 SH2B2O14492 632 aaPredicted RBP23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 FIBPO43427 364 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 LGALS2P05162 132 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 IKBKEQ14164 716 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 METTL7BQ6UX53 244 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 SERINC5Q86VE9 423 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 WNT8BQ93098 351 aa23.17■■□□□ 1.3
RPUSD3-213ENST00000472381 EMSYQ7Z589 1322 aa23.16■■□□□ 1.3
RPUSD3-213ENST00000472381 C17orf102A2RUQ5 167 aa23.16■■□□□ 1.3
RPUSD3-213ENST00000472381 PIK3CDO00329 1044 aa23.16■■□□□ 1.3
RPUSD3-213ENST00000472381 CALM1P0DP23 149 aa23.16■■□□□ 1.3
RPUSD3-213ENST00000472381 CALM2P0DP24 149 aa23.16■■□□□ 1.3
RPUSD3-213ENST00000472381 CALM3P0DP25 149 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms